H1YYX6 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Mrr_cat domain-containing protein
Main knot	3₁ (91%)
Global pLDDT	80.66
Species	Methanoplanus limicola
UniProt	H1YYX6
Structure Prediction Model	AlphaFold v4: H1YYX6
PDB structures	-
Structure in AlphaLasso	H1YYX6: L₀
Model length	322
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.2	144-294	151	1-143, 295-322	143	28

Model Sequence

MIRERAVKAISDILNSAGYETGEGNEQIDLSAYTDDDCIVVLCSDDEDRIDNFNNKKFRIELESGKKECRKIVFTMNNNVHAENCTIWSYQDLAKYSGQAVVAYVLNENLALRFEADKKKAEYKPYSSGSEKYDEPDEYAPELPLLPSRISDEKARRIAGIKGTLKKLYIPHYLYECRSSGEKRYKSHIIDFNSEVFGLVNAVSGKKSPADDEELNFSVVEEKRVPESAEIVQPHVSKKEIKEEIRKDFVEELTKSVRVSTTEGDTIYYEDKEVKPDEETVSTEIMLVYLPVIQIRGDKIVEINAFTGEFLEEPMDDGVELF

Comments

ESM1

Categories voted by users:

Information

Protein name	Mrr_cat domain-containing protein
Main knot	3₁ (85%)
Global pLDDT	83.48
Species	Methanoplanus limicola
UniProt	H1YYX6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Structure in AlphaLasso	H1YYX6: L₀
Model length	322
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					90.9	144-294	151	1-143, 295-322	143	28

Model Sequence

Comments

Domain	Archaea
Family	Methanomicrobiaceae
Species (Full Name)	Methanoplanus limicola DSM 2279
Gene	Metlim_3016
PDB structures (whole Protein)	-

H1YYX6F1

AF4

Model Sequence

ESM1

Model Sequence