H2M9Z1F1

Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (82%)
Global pLDDT
87.52
Species
Japanese rice fish
UniProt
Structure Prediction Model
AlphaFold v4:  H2M9Z1
PDB structures
-
Model length
329
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
88.8 9-221 213 1-8, 222-329 8 108
Model Sequence
MSGSAGEWCLMESDPGVFTELIKGFGCKGAQVEEIWSMEPENFENLKPVHGLIFLFKWQPGEEPAGSIVQDSRLDHIFFAKQVINNACATQAIVSVLLNCSHSDIVLGDTLSEFREFSQSFDAAMKGLALSNSEVIRQVHNSFARQQMFEFDAKSSAKDEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQDDWINAVRPVIEKRIQKYSEGEIRFNLMSIVSDRKMIYEKKIAELQAQLTEDEPMDTDQSSSFLSSIQSEIAKYQLLIEEENQKLKRYKIENIRRKHNYLPFIMELLKTLAEYQQLMPLVEKAKEKQSAKKAQEAK
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (79%)
Global pLDDT
88.29
Species
Japanese rice fish
UniProt
Structure Prediction Model
PDB structures
-
Model length
329
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
87.3 10-221 212 1-9, 222-329 9 108
Model Sequence
MSGSAGEWCLMESDPGVFTELIKGFGCKGAQVEEIWSMEPENFENLKPVHGLIFLFKWQPGEEPAGSIVQDSRLDHIFFAKQVINNACATQAIVSVLLNCSHSDIVLGDTLSEFREFSQSFDAAMKGLALSNSEVIRQVHNSFARQQMFEFDAKSSAKDEDAFHFVSYVPVNGRLYELDGLREGPIDLGACNQDDWINAVRPVIEKRIQKYSEGEIRFNLMSIVSDRKMIYEKKIAELQAQLTEDEPMDTDQSSSFLSSIQSEIAKYQLLIEEENQKLKRYKIENIRRKHNYLPFIMELLKTLAEYQQLMPLVEKAKEKQSAKKAQEAK
Comments
Domain Eukaryota
Family Adrianichthyidae
Species (Full Name) Oryzias latipes (Japanese rice fish) (Japanese killifish)
Gene uchl5
PFAM codes  PF01088,  PF18031
InterPro codes  IPR001578,  IPR017390,  IPR033837,  IPR036959,  IPR038765,  IPR041507
PDB structures (whole Protein) -
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