H9UIB9F1

TraB/GumN family protein
AF4
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
52 (57%)
Global pLDDT
82.13
Species
Spirochaeta africana
UniProt
Structure Prediction Model
AlphaFold v4:  H9UIB9
PDB structures
-
Model length
334
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
84.7 26-311 286 1-25, 312-334 25 23
Model Sequence
MQISNSRRLIAPVYAAASLLMAVLLLSIGCATDTDDRLAEPRLDDDRGELFLWSVAEPQAFLADGSLATPDSAERDTGVLHIYGSIHLATRDVYPLPDIVYSLFENSDVLVLEIDLAQATPNAFFGLQSLMEYPDGSNLEDDLNEHEIELLSDTLGSLGIPFDMVRHLKPWVLEATLVTSLAEQQGIKAEYGIDMHFAELAADLDIPVIALETIEEQLGILGNLPTSTQAAELMRSIENFQDISGYIAQLLTLWRTGDLTGMEEVIAGSMRDDPELATYYDSMFVDRNRAWIPPLREQLAEGKDVFVVVGAGHLVGPDNVIELLRAEGLRAVRY
Comments
ESM1
Categories voted by users:
Information
Protein name
TraB/GumN family protein
Main knot
31 (63%)
Global pLDDT
86.98
Species
Spirochaeta africana
UniProt
Structure Prediction Model
PDB structures
-
Model length
334
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
60.1 20-192 173 1-19, 193-334 19 142
Model Sequence
MQISNSRRLIAPVYAAASLLMAVLLLSIGCATDTDDRLAEPRLDDDRGELFLWSVAEPQAFLADGSLATPDSAERDTGVLHIYGSIHLATRDVYPLPDIVYSLFENSDVLVLEIDLAQATPNAFFGLQSLMEYPDGSNLEDDLNEHEIELLSDTLGSLGIPFDMVRHLKPWVLEATLVTSLAEQQGIKAEYGIDMHFAELAADLDIPVIALETIEEQLGILGNLPTSTQAAELMRSIENFQDISGYIAQLLTLWRTGDLTGMEEVIAGSMRDDPELATYYDSMFVDRNRAWIPPLREQLAEGKDVFVVVGAGHLVGPDNVIELLRAEGLRAVRY
Comments
Domain Bacteria
Family Spirochaetaceae
Species (Full Name) Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692)
Gene Spiaf_1183
PFAM codes  PF01963
InterPro codes  IPR002816
PDB structures (whole Protein) -
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