I1MV53F1

Ubiquitin carboxyl-terminal hydrolase
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (63%)
Global pLDDT
88.09
Species
Soybn
UniProt
Structure Prediction Model
AlphaFold v4:  I1MV53
PDB structures
-
Model length
254
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
89.9 17-246 230 1-16, 247-254 16 8
Model Sequence
MATLDERPSAKRWLPLEANPDVMNQFLWGLGLPVDEAECGDVFGLDEELLEMVPKPVLAVLFLYPITAKSEEERLQQENVKKDYSSKVYFMKQTVGNACGTIGLLHALGNITSEVKLVEGSFFDKFFKSTASMDPLQRAVFLENDREMEVAHSVAATAGDTVITDVVMKGLVWLSYLENLASDNVDTHFICFACVDGELYELDGRKSGPISHGPSSPSTLLRDAAKVIQSMIQKNPGSLNFNVIAISKKSKDGH
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (64%)
Knot fingerprint
K 52 31 31
Global pLDDT
88.09
Species
Soybn
UniProt
Structure Prediction Model
AlphaFold v1:  I1MV53
PDB structures
-
Model length
254
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
89.8 14-244 231 1-13, 245-254 13 10 Knot
88.1 14-190 177 1-13, 191-254 13 64 Slipknot
Model Sequence
MATLDERPSAKRWLPLEANPDVMNQFLWGLGLPVDEAECGDVFGLDEELLEMVPKPVLAVLFLYPITAKSEEERLQQENVKKDYSSKVYFMKQTVGNACGTIGLLHALGNITSEVKLVEGSFFDKFFKSTASMDPLQRAVFLENDREMEVAHSVAATAGDTVITDVVMKGLVWLSYLENLASDNVDTHFICFACVDGELYELDGRKSGPISHGPSSPSTLLRDAAKVIQSMIQKNPGSLNFNVIAISKKSKDGH
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (58%)
Global pLDDT
86.58
Species
Soybn
UniProt
Structure Prediction Model
PDB structures
-
Model length
254
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
81.5 13-246 234 1-12, 247-254 12 8
Model Sequence
MATLDERPSAKRWLPLEANPDVMNQFLWGLGLPVDEAECGDVFGLDEELLEMVPKPVLAVLFLYPITAKSEEERLQQENVKKDYSSKVYFMKQTVGNACGTIGLLHALGNITSEVKLVEGSFFDKFFKSTASMDPLQRAVFLENDREMEVAHSVAATAGDTVITDVVMKGLVWLSYLENLASDNVDTHFICFACVDGELYELDGRKSGPISHGPSSPSTLLRDAAKVIQSMIQKNPGSLNFNVIAISKKSKDGH
Comments
Domain Eukaryota
Family Fabaceae
Species (Full Name) Glycine max
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -
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