I4LXF1F1

tRNA/rRNA methyltransferase protein
AF4
Categories voted by users:
Information
Protein name
tRNA/rRNA methyltransferase protein
Main knot
31 (93%)
Global pLDDT
86.72
Species
Gardnerella vaginalis
UniProt
Structure Prediction Model
AlphaFold v4:  I4LXF1
PDB structures
-
Model length
329
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
93.1 251-293 43 1-250, 294-329 250 36
Model Sequence
MKKGPTKGSGGKHRNALRGKGPTPKAEDRVYHKAYFAKKAAIKRTFADPRLAARRRVDKLGTDSDELVIGRNAALEALRVGVPSTQLYVANRIEHDDRTREIVKLAGMQGLRLLEADRLEMDRIAHSTNHQGIILKVQPYQYYSLQELVDRAEKKSRAMEAADSASARINARPLFIALDGVTDPQNLGAVIRSAAAFGANGVILPERRSASVTAAAWKVSAGAAAHLPVARVVNLNKAIQGLRERGWYAIGLDGGGDKLVGETGFETDPLVVVLGSEGKGMSRLTREACDAIAGIPISSAVESLNASVAAGISLYAVANARRLAALSQN
Comments
ESM1
Categories voted by users:
Information
Protein name
tRNA/rRNA methyltransferase protein
Main knot
31 (90%)
Global pLDDT
89.41
Species
Gardnerella vaginalis
UniProt
Structure Prediction Model
PDB structures
-
Model length
329
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
80.8 251-293 43 1-250, 294-329 250 36
Model Sequence
MKKGPTKGSGGKHRNALRGKGPTPKAEDRVYHKAYFAKKAAIKRTFADPRLAARRRVDKLGTDSDELVIGRNAALEALRVGVPSTQLYVANRIEHDDRTREIVKLAGMQGLRLLEADRLEMDRIAHSTNHQGIILKVQPYQYYSLQELVDRAEKKSRAMEAADSASARINARPLFIALDGVTDPQNLGAVIRSAAAFGANGVILPERRSASVTAAAWKVSAGAAAHLPVARVVNLNKAIQGLRERGWYAIGLDGGGDKLVGETGFETDPLVVVLGSEGKGMSRLTREACDAIAGIPISSAVESLNASVAAGISLYAVANARRLAALSQN
Comments
Domain Bacteria
Family Bifidobacteriaceae
Species (Full Name) Gardnerella vaginalis 1400E
Gene CGSMWGv1400E_02151
PFAM codes  PF00588,  PF08032
InterPro codes  IPR001537,  IPR004441,  IPR013123,  IPR029026,  IPR029028,  IPR029064
PDB structures (whole Protein) -
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