I4M3H3F1

RNA methyltransferase, TrmH family, group 3
AF4
Categories voted by users:
Information
Protein name
RNA methyltransferase, TrmH family, group 3
Main knot
31 (93%)
Global pLDDT
86.14
Species
Gardnerella vaginalis
UniProt
Structure Prediction Model
AlphaFold v4:  I4M3H3
PDB structures
-
Model length
329
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
92.9 251-293 43 1-250, 294-329 250 36
Model Sequence
MKKGPTKGSGGKHRNALRGKGPTPKAEDRVYHKAYFAKKAAIKRTFADPRLAARRRVDKLGTDSDELVIGRNAALEALRVGVPSTQLYVANRIEHDDRTREIVKLAGMQGLRLLEADRLEMDRIAHSTNHQGIILKVQPYQYYSLQELVDRAEKKARAMEAADSASARINARPLFIALDGVTDPQNLGAVIRSAAAFGANGVILPERRSASVTAAAWKVSAGAAAHLPVARVVNLNKAIQGLRERGWYAIGLDGGGDKLVGETGFETDPLVVVLGSEGKGMSRLTREACDAIAGIPISSAVESLNASVAAGISLYAVANARRLAALSQN
Comments
ESM1
Categories voted by users:
Information
Protein name
RNA methyltransferase, TrmH family, group 3
Main knot
31 (90%)
Global pLDDT
89.37
Species
Gardnerella vaginalis
UniProt
Structure Prediction Model
PDB structures
-
Model length
329
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
80.6 251-293 43 1-250, 294-329 250 36
Model Sequence
MKKGPTKGSGGKHRNALRGKGPTPKAEDRVYHKAYFAKKAAIKRTFADPRLAARRRVDKLGTDSDELVIGRNAALEALRVGVPSTQLYVANRIEHDDRTREIVKLAGMQGLRLLEADRLEMDRIAHSTNHQGIILKVQPYQYYSLQELVDRAEKKARAMEAADSASARINARPLFIALDGVTDPQNLGAVIRSAAAFGANGVILPERRSASVTAAAWKVSAGAAAHLPVARVVNLNKAIQGLRERGWYAIGLDGGGDKLVGETGFETDPLVVVLGSEGKGMSRLTREACDAIAGIPISSAVESLNASVAAGISLYAVANARRLAALSQN
Comments
Domain Bacteria
Family Bifidobacteriaceae
Species (Full Name) Gardnerella vaginalis 00703Bmash
Gene CGSMWGv00703Bmash_03538
PFAM codes  PF00588,  PF08032
InterPro codes  IPR001537,  IPR004441,  IPR013123,  IPR029026,  IPR029028,  IPR029064
PDB structures (whole Protein) -
How to cite