J3M2F6F1

Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (91%)
Global pLDDT
85.35
Species
malo sina
UniProt
Structure Prediction Model
AlphaFold v4:  J3M2F6
PDB structures
-
Model length
252
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
89.7 26-237 212 1-25, 238-252 25 15
Model Sequence
MAAPSSAAAAPAPAPVSPDERWPPLESSPDVFNQLMWSLGVPEDVAEFHDVYSLDADALEMVPRPVLAVIFCFPDPTQDASNPSQHVLVTGEKETLFFIKQIESLGNACGTIALIHAVGNAYPEISLLKNSSLDTFAKSSSGMTSYERAMFLEKDDDMARAHSVAASAGDTKLSDDVEEHYICFVECDGTLYELDGMKPGPIKHGSSSPESLLQDAVNIIKATMHNIPNSVKFNVMVLSRKAEQYGAIIPDN
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot
52 (92%)
Global pLDDT
89.51
Species
malo sina
UniProt
Structure Prediction Model
PDB structures
-
Model length
252
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
91.8 26-236 211 1-25, 237-252 25 16
Model Sequence
MAAPSSAAAAPAPAPVSPDERWPPLESSPDVFNQLMWSLGVPEDVAEFHDVYSLDADALEMVPRPVLAVIFCFPDPTQDASNPSQHVLVTGEKETLFFIKQIESLGNACGTIALIHAVGNAYPEISLLKNSSLDTFAKSSSGMTSYERAMFLEKDDDMARAHSVAASAGDTKLSDDVEEHYICFVECDGTLYELDGMKPGPIKHGSSSPESLLQDAVNIIKATMHNIPNSVKFNVMVLSRKAEQYGAIIPDN
Comments
Domain Eukaryota
Family Poaceae
Species (Full Name) Oryza brachyantha (malo sina)
Gene 102705430
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -
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