L1NJ51F1

Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
AF4
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Main knot
31 (89%)
Global pLDDT
92.91
Species
Porphyromonas catoniae
UniProt
Structure Prediction Model
AlphaFold v4:  L1NJ51
PDB structures
-
Model length
250
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
95.1 161-213 53 1-160, 214-250 160 37
Model Sequence
MKDLPLFYAPQLREEQQLPEAEALHAIKALRTSIGDELLVTDGRGMLYETIVTAVDRRHCFVSITREQTWHKYWSGCWSVAIAPTKSVDRIEWMIEKMVEVGVDEIILLRTKHSERKHINQERLERIVQSAMKQSQKALLPTLRTDVSFANLLSEAKQPIRLIAHCREGISPERVTIDRAFSPKQDILIAIGPEGDFTTEELEEAIRTGFVPVTLGESRLRTETAGLIALQWLHTLHMLSLHNTTENSKQ
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193)
Main knot
31 (84%)
Global pLDDT
91.22
Species
Porphyromonas catoniae
UniProt
Structure Prediction Model
PDB structures
-
Model length
250
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
97.7 163-213 51 1-162, 214-250 162 37
Model Sequence
MKDLPLFYAPQLREEQQLPEAEALHAIKALRTSIGDELLVTDGRGMLYETIVTAVDRRHCFVSITREQTWHKYWSGCWSVAIAPTKSVDRIEWMIEKMVEVGVDEIILLRTKHSERKHINQERLERIVQSAMKQSQKALLPTLRTDVSFANLLSEAKQPIRLIAHCREGISPERVTIDRAFSPKQDILIAIGPEGDFTTEELEEAIRTGFVPVTLGESRLRTETAGLIALQWLHTLHMLSLHNTTENSKQ
Comments
Domain Bacteria
Family Porphyromonadaceae
Species (Full Name) Porphyromonas catoniae F0037
Gene HMPREF9134_00017
PFAM codes  PF04452
InterPro codes  IPR006700,  IPR015947,  IPR029026,  IPR029028,  IPR046886,  IPR046887
PDB structures (whole Protein) -
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