L9KLJ1 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	tRNA methyltransferase 10 homolog A (EC 2.1.1.221) (RNA (guanine-9-)-methyltransferase domain-containing protein 2) (tRNA (guanine(9)-N(1))-methyltransferase TRMT10A)
Main knot	3₁ (97%)
Global pLDDT	73.13
Species	Chinese tree shrew
UniProt	L9KLJ1
Structure Prediction Model	AlphaFold v4: L9KLJ1
PDB structures	-
Model length	339
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					96.2	185-231	47	1-184, 232-339	184	108

Model Sequence

MSSETLPVFIDTSNGERKQDVSEDPEESEKPRLGEGSEAVSKRQMKKLMRQKQWEEQRELRKQKRKEKRKRKKLERQCQLEPNSDGNDRKRIRRHVVPSTLRLIIDCSFDDLMVLKDIKKLHKQIQRCYAENRRALHPVQFYLTSHGGQLKKNMDENDKGWINWKDIYIKPEHYSELMKKEDLIYLTSDSPNVLKELDESKAYVIGGLVDHNHHKGLTHKQASDHGIDHAQLPLGNFVKMNSRKVLAVNHVFEIILGYLETRDWQEAFFTILPQRKGAVPTDKACENPSHDKQSARLEGGSESDSSEEECSRIELDLPPEEEKQDKENGTEPTVDTALH

Comments

ESM1

Categories voted by users:

Information

Protein name	tRNA methyltransferase 10 homolog A (EC 2.1.1.221) (RNA (guanine-9-)-methyltransferase domain-containing protein 2) (tRNA (guanine(9)-N(1))-methyltransferase TRMT10A)
Main knot	3₁ (89%)
Global pLDDT	83.16
Species	Chinese tree shrew
UniProt	L9KLJ1
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	339
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					66.8	185-231	47	1-184, 232-339	184	108

Model Sequence

Comments

Domain	Eukaryota
Family	Tupaiidae
Species (Full Name)	Tupaia chinensis (Chinese tree shrew)
Gene	TREES_T100009121
PFAM codes	PF01746
InterPro codes	IPR007356, IPR016009, IPR016653, IPR028564, IPR038459
PDB structures (whole Protein)	-

L9KLJ1F1

AF4

Model Sequence

ESM1

Model Sequence