| Protein name |
Retrotransposon Gag-like 9
|
| Main knot |
Unknown (100%)
|
| Knot fingerprint |
S Unknown 75(x9) 52(x6) 41(x2) 31(x2)
|
| Global pLDDT |
40.5
|
| Species |
Rat
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v1:
 M0R6H3
|
| PDB structures |
-
|
| Model length |
1373
|
| AlphaFold deposition date |
2021-07-01
|
| AlphaKnot deposition date |
2021-12-18
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
30.8 | 516-894 | 379 | 1-515, 895-1373 | 515 | 479 | Slipknot | |||||
 |
34.2 | 66-742 | 677 | 1-65, 743-1373 | 65 | 631 | Slipknot | |||||
 |
30.5 | 511-988 | 478 | 1-510, 989-1373 | 510 | 385 | Slipknot | |||||
 |
30.2 | 514-884 | 371 | 1-513, 885-1373 | 513 | 489 | Slipknot | |||||
 |
30.5 | 507-1083 | 577 | 1-506, 1084-1373 | 506 | 290 | Slipknot |
Model Sequence |
MADMSIPLHSLRFNNMMKEESGDPQNRGATFPRPMTETRAEVQILHSQLQLPTVSTSTSDPEGTSTQLTTSPAFDSLSTPLMGASHSGTVSPPLMSASDSGTLSPLLMTASDSGTLSPLLMPVSDSGTLSPLLMPTSDSGTLSPLLSTSDYGLMSPGMMTIPDFGTMSTSLMAAPDSAEMSPLAMPVPSAGVMSAPIMSTSPSEASLMLGSDPGEMSPLLIPDMNPGVTSTPPMTAPGSEAMSPLQITDEDTEAMSKVLMTALASGEISSLLMSGTDSEVISSLIMSALASGETSTQPTNPQDSEGIPSVLMPGSDSGVMSSLPMPASGSGAMPAPLLSIPDAGEITLPKPVPDAEAMSPLLMTALTSTVMPSQLMSASGSGVMSPDVTQNINSEVMTAPPLRVAASGLMSTLPTRTSDTEAAPIQLMRVPASGNMSTSQKTVPVSGSMSTPLMAVSSPVAMFTEEMSNTTSGMMSTHLTMPQTSGMMPIGFMKATANGAVSAQQMRGSASGMMPTQPVIATASEIMSVSQSTVPTSGSVSTQKTRAPVSGPMSTTQIRTTASGLTSTPQMKATASGTMSIPLMTAKTSGSASTLLMRDTASGVISVPQMRAPSSGSLSKPLMTSKASGMFMQQMTTAAFGATPTSLIRDTASGGLSMPQMTDPASGGMSTLLTRATASGATSTSQMTATTSGGMSMLQTRLSGPGATATSLMRATASEMIPSQPVNMQDSGGVAIPLMRPVALGGMQMRSQGSGTMSTPLLRASDSSEMSTLLTKAPSSGERPLLLMRPPASGEIVPPPRTPVYGTISAPHMTTTASGVMTMSPMKASVPASESTALQRSTDSGGMSTPLMRTAVSRTKPIPQMMTTACGDVCPCPVRAAATAGISPSPVRPLASSTVSTPLRRPSDGAGTAELERVLGPGIMSSAQLAAMTSGEMSKPLMRASAPGTTPMPLMSPMTSGEMSMPLMKTMPSGTMSTLQTKVMSSRATSLPQPINAASGGIANPPLRAPASGAVSTPLMRVSGSGMMPMPLLRATASGGISVPQVTAPSSGDVSSPLLRAPTPGIMSTPQTAFGMTPALNIKVTDSGEASTSHTRVTAPGYKSTPHTTSTVPEVKTPPPKEVPSFGMLTPALCYLLEEQEAARGSSSVEEDEEEIDEEKQMKGFLDDSEKMAFLVSLHLGAAERWSILQMEVGNPVSSENKAFLRRSQGLYDSLSEIDILSAVLCHPKQGKKSVRQYATDFLLLARHLSWSDAILRTRFLEGLSEAVTTKMGRIFLKVAGSLKELIDRSLYTECQLAEEKDSSGNASQVVPTACKRNNEEAMENELGCQQQTEEHQHVPKRCYYLKEHGDPQESLHDHLRQSAGLPKAPTNK
|
| Domain |
Eukaryota
|
| Family |
Muridae
|
| Species (Full Name) |
Rattus norvegicus
|
| PDB structures (whole Protein) |
-
|
M0R6H3