M1IRJ9F1

Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
AF4
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
Main knot
31 (78%)
Global pLDDT
95.46
Species
Sulfolobus acidocaldarius
UniProt
Structure Prediction Model
AlphaFold v4:  M1IRJ9
PDB structures
-
Structure in AlphaLasso
  M1IRJ9: L+1N
Model length
213
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
94.9 143-189 47 1-142, 190-213 142 24
Model Sequence
MLDSALELVPREIVSHPAVVKNAVRRGKKAENTLLDISLHYKAMKNLENANKRGRPDIVHFALLLFLTLEEEIRGDLFIHTIDGKIIFVDRQMRPPKNYNRFVGLMEQLLLEGKIPPKGDRTLMEITNLKLKDLSRKYSSLIVLSESGRKVNPADLCKLMHENVLFGVGAFAHGDFSSEVKESASDFLSISKNVLETHQVICRVSIACSGFLS
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
Main knot
31 (79%)
Global pLDDT
91.5
Species
Sulfolobus acidocaldarius
UniProt
Structure Prediction Model
PDB structures
-
Structure in AlphaLasso
  M1IRJ9: L+1N
Model length
213
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
96.0 1-189 189 190-213 0 24
Model Sequence
MLDSALELVPREIVSHPAVVKNAVRRGKKAENTLLDISLHYKAMKNLENANKRGRPDIVHFALLLFLTLEEEIRGDLFIHTIDGKIIFVDRQMRPPKNYNRFVGLMEQLLLEGKIPPKGDRTLMEITNLKLKDLSRKYSSLIVLSESGRKVNPADLCKLMHENVLFGVGAFAHGDFSSEVKESASDFLSISKNVLETHQVICRVSIACSGFLS
Comments
Domain Archaea
Family Sulfolobaceae
Species (Full Name) Sulfolobus acidocaldarius N8
Gene nep1 SacN8_00165
PFAM codes  PF03587
InterPro codes  IPR005304,  IPR023503,  IPR029026,  IPR029028
PDB structures (whole Protein) -
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