M1PYL9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Mrr_cat domain-containing protein
Main knot	3₁ (82%)
Global pLDDT	73.92
Species	Methanosarcina mazei
UniProt	M1PYL9
Structure Prediction Model	AlphaFold v4: M1PYL9
PDB structures	-
Model length	382
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					89.4	203-353	151	1-202, 354-382	202	29

Model Sequence

MRIMKQDLLELLVDIFKSSGYNVIISSQYDILVEKNGHKAYVMCALSPDYEEIKSFSEKIKGCTGIYVITQKTSGELDDYAAELGIYIWDRDELALQIGRAVLTNMERKSRNCQTESELPSRECQNNVSPTSESARDNWKESFEQEPCSGGGLVPLQELSGGTERVSFESRIRPPVQERKPLKRIEDDETQGAEEYETLNIQSVEPRISKDQAIIIAKPYLIGPKDAILKFVPFWMYSYSVEAEKRFRSKVVNITGEGKGFLNALNKSKENMDIEGLGTPTRIPAVQYEVKRPNVDKKQAEKILLDFIIQENTREMRFNNLEGQAVIYEQKNISPRADEVELNMDLVYVPVWEVKGKRNSLEINAYNASILEEPVDEDAEFV

Comments

ESM1

Categories voted by users:

Information

Protein name	Mrr_cat domain-containing protein
Main knot	3₁ (86%)
Global pLDDT	79.41
Species	Methanosarcina mazei
UniProt	M1PYL9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	382
ESM generation time	2023-06-24: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.5	203-353	151	1-202, 354-382	202	29

Model Sequence

Comments

Domain	Archaea
Family	Methanosarcinaceae
Species (Full Name)	Methanosarcina mazei Tuc01
Gene	MmTuc01_2096
PDB structures (whole Protein)	-

M1PYL9F1

AF4

Model Sequence

ESM1

Model Sequence