M3WRI6 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (69%)
Global pLDDT	85.88
Species	Cat
UniProt	M3WRI6
Structure Prediction Model	AlphaFold v4: M3WRI6
PDB structures	-
Model length	262
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					87.2	10-252	243	1-9, 253-262	9	10

Model Sequence

MEGQRWLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEESVSMSPEERARYLENYDAIRVTHETSAHEGQTEAPSIDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETSDETLLEDAIEVCKKFMERDPDELSWTSYAEDRPLSTGNLEATGQCLHPATCGLAITHGGSQHHGR

Comments

ESM1

Categories voted by users:

Information

Protein name	Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)
Main knot	5₂ (61%)
Global pLDDT	82.41
Species	Cat
UniProt	M3WRI6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	262
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.5	10-252	243	1-9, 253-262	9	10

Model Sequence

Comments

Domain	Eukaryota
Family	Felidae
Species (Full Name)	Felis catus (Cat) (Felis silvestris catus)
Gene	UCHL3
PFAM codes	PF01088
InterPro codes	IPR001578, IPR036959, IPR038765
PDB structures (whole Protein)	-

M3WRI6F1

AF4

Model Sequence

ESM1

Model Sequence