M8ABW9 | AlphaKnot 2.0

AF4

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Information

Protein name	Type I secretion protein
Main knot	8₁₉ (63%)
Global pLDDT	73.41
Species	Agrobacterium tumefaciens str
UniProt	M8ABW9
Structure Prediction Model	AlphaFold v4: M8ABW9
PDB structures	-
Model length	672
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.5	292-592	301	1-291, 593-672	291	80

Model Sequence

MHIDKISDMIAHFIGLFDTVIEEARLRTNYSEGPAHSDPDRLPDDEAAKLLDKNYDVPLKDYDPGVNYRAGYYDFDYLQPHFARMVEHDMQRLADAIPVDISGVNFRFPGRLSFEEEYELVVHTGPGSVIAHVAQVNILQDDDYLNMTDGPYVWRDTSFVTERTVEFYNEASVFTPFAGFQRTDSYDALQALAKSAHDYIDHARENDVTSLGTGADQDFVLAGNNIDGLYINGSIASEKPMLDDYMPDRGIAKPAEEPEKSDVSLHEDSPAGNSLDVAAGANVVANIATLVNTGVMTSVTAVMGDYHQIDAITQAYIYSDRDEIDSVFARSEDQAATAAFNIASFERSVYPGAENTENSSQENGEPPIFPTAWRVSVLEGDVSFVHWIEQYQFVSDNDTMTITTSGATVSLLTGGNAALNIANFLGIGMQYDLIIVGGNVLDMNIISQIAVLYDNDWARANPDAPEGATIQSGNNLLWNDAAIHNVGSNDRFETMPDYMNQTVNAINERDPNMPDALAHDVNFAGYEGLNVLYITGNLYDVSIIKQVSVLGDSDDVTQAAAKVLENNEDATVHIDTGSNAVVNLAQIVDYDSFGSTTYVAGGVYSDAILIQGGIIENDTSQPQQGQLANEVIAFLHDDPATIENESNGVINAGHDLSWSNGHSADVMQAVTA

Comments

Domain	Bacteria
Family	Rhizobiaceae
Species (Full Name)	Agrobacterium tumefaciens str. Cherry 2E-2-2
Gene	H009_20661
PDB structures (whole Protein)	-

M8ABW9F1

AF4

Model Sequence