O00534F1

von Willebrand factor A domain-containing protein 5A
AF4
Categories voted by users:
Information
Protein name
von Willebrand factor A domain-containing protein 5A
Main knot
63 (70%)
Global pLDDT
83.78
Species
Human
UniProt
Structure Prediction Model
AlphaFold v4:  O00534
PDB structures
-
Model length
786
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Knot map - computed using the Web Server in job: 59b4d106a929af

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range Slipknot tails Slipknot loops Main Knot
88.5 29-611 583 1-28, 612-786 Knot
88.6 148-592 445 1-147, 593-786 Slipknot
Model Sequence
MVHFCGLLTLHREPVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSAVYSFEALVDGKKIVAELQDKMKARTNYEKAISQGHQAFLLEGDSSSRDVFSCNVGNLQPGSKAAVTLKYVQELPLEADGALRFVLPAVLNPRYQFSGSSKDSCLNVKTPIVPVEDLPYTLSMVATIDSQHGIEKVQSNCPLSPTEYLGEDKTSAQVSLAAGHKFDRDVELLIYYNEVHTPSVVLEMGMPNMKPGHLMGDPSAMVSFYPNIPEDQPSNTCGEFIFLMDRSGSMQSPMSSQDTSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRVKLMQADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGEVTDTFSVIKEVRINRQKHRCFSFGIGEGTSTSLIKGIARASGGTSEFITGKDRMQSKALRTLKRSLQPVVEDVSLSWHLPPGLSAKMLSPEQTVIFRGQRLISYAQLTGRMPAAETTGEVCLKYTLQGKTFEDKVTFPLQPKPDVNLTIHRLAAKSLLQTKDMGLRETPASDKKDALNLSLESGVISSFTAFIAINKELNKPVQGPLAHRDVPRPILLGASAPLKIKCQSGFRKALHSDRPPSASQPRGELMCYKAKTFQMDDYSLCGLISHKDQHSPGFGENHLVQLIYHQNANGSWDLNEDLAKILGMSLEEIMAAQPAELVDSSGWATILAVIWLHSNGKDLKCEWELLERKAVAWMRAHAGSTMPSVVKAAITFLKSSVDPAIFAF
Knot Pull simplified model computed using the Web Server in job: 59b4d106a929af
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
von Willebrand factor A domain-containing protein 5A
Main knot
63 (76%)
Knot fingerprint
K 63 31 63 31
Global pLDDT
83.7
Species
Human
UniProt
Structure Prediction Model
AlphaFold v1:  O00534
PDB structures
-
Model length
786
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range Slipknot tails Slipknot loops Main Knot
88.6 30-610 581 1-29, 611-786 Knot
89.0 132-614 483 1-131, 615-786 Slipknot
Model Sequence
MVHFCGLLTLHREPVPLKSISVSVNIYEFVAGVSATLNYENEEKVPLEAFFVFPMDEDSAVYSFEALVDGKKIVAELQDKMKARTNYEKAISQGHQAFLLEGDSSSRDVFSCNVGNLQPGSKAAVTLKYVQELPLEADGALRFVLPAVLNPRYQFSGSSKDSCLNVKTPIVPVEDLPYTLSMVATIDSQHGIEKVQSNCPLSPTEYLGEDKTSAQVSLAAGHKFDRDVELLIYYNEVHTPSVVLEMGMPNMKPGHLMGDPSAMVSFYPNIPEDQPSNTCGEFIFLMDRSGSMQSPMSSQDTSQLRIQAAKETLILLLKSLPIGCYFNIYGFGSSYEACFPESVKYTQQTMEEALGRVKLMQADLGGTEILAPLQNIYRGPSIPGHPLQLFVFTDGEVTDTFSVIKEVRINRQKHRCFSFGIGEGTSTSLIKGIARASGGTSEFITGKDRMQSKALRTLKRSLQPVVEDVSLSWHLPPGLSAKMLSPEQTVIFRGQRLISYAQLTGRMPAAETTGEVCLKYTLQGKTFEDKVTFPLQPKPDVNLTIHRLAAKSLLQTKDMGLRETPASDKKDALNLSLESGVISSFTAFIAINKELNKPVQGPLAHRDVPRPILLGASAPLKIKCQSGFRKALHSDRPPSASQPRGELMCYKAKTFQMDDYSLCGLISHKDQHSPGFGENHLVQLIYHQNANGSWDLNEDLAKILGMSLEEIMAAQPAELVDSSGWATILAVIWLHSNGKDLKCEWELLERKAVAWMRAHAGSTMPSVVKAAITFLKSSVDPAIFAF
Comments
Domain Eukaryota
Family Hominidae
Species (Full Name) Homo sapiens
PFAM codes  PF08487,  PF13768
InterPro codes  IPR002035,  IPR013694,  IPR036465
PDB structures (whole Protein) -

Identical Structures in AlphaKnot - computed using the Web Server in job: 59b4d106a929af
Structure ID Identity Length AF4 Model Topology ESM Model Topology Organism Link
O00534
96.4 %
786
63 (70%)
N/A
Human
A0A024R3H3
96.4 %
786
31 (58%)
N/A
Human
A8K6N3
96.3 %
786
63 (70%)
N/A
Human
A0A2R9BIJ4
95.5 %
786
63 (67%)
N/A
Pygmy chimpanzee
H2Q509
95.3 %
785
63 (69%)
N/A
Chimpanzee
G3S1Y9
95.2 %
786
63 (70%)
N/A
Western lowland gorilla
A0A2J8N1T0
95.2 %
785
63 (71%)
N/A
Chimpanzee
G1R775
94.5 %
786
63 (68%)
N/A
Northern white-cheeked gibbon
A0A2J8X032
93.1 %
786
63 (70%)
N/A
Sumatran orangutan
H2NFN9
92.5 %
821
63 (78%)
N/A
Sumatran orangutan
A0A2K6PU45
91.2 %
786
31 (59%)
N/A
Golden snub-nosed monkey
A0A2K5HXW1
90.9 %
786
63 (71%)
N/A
Peters' Angolan colobus
A0A2K5WGB0
90.9 %
786
63 (72%)
N/A
Crab-eating macaque
A0A2K5YI15
90.9 %
786
63 (71%)
N/A
Drill
A0A2K6LXJ2
90.9 %
786
63 (70%)
N/A
Black snub-nosed monkey
G7NCN9
90.8 %
786
63 (72%)
N/A
Rhesus macaque
A0A096NDY1
90.8 %
786
63 (74%)
N/A
Olive baboon
G7PPE4
90.8 %
786
63 (74%)
N/A
Crab-eating macaque
H9FUD4
90.6 %
786
63 (69%)
N/A
Rhesus macaque
A0A2K6CIS8
90.7 %
786
63 (73%)
N/A
Pig-tailed macaque
A0A2K5NIE1
90.6 %
786
52 (60%)
N/A
Sooty mangabey
M3ZC12
90.2 %
772
63 (73%)
N/A
Northern white-cheeked gibbon
F6VIM6
91.1 %
761
63 (81%)
N/A
Rhesus macaque
A0A2K6PU34
86.8 %
781
63 (70%)
N/A
Golden snub-nosed monkey
A0A6J3IEM7
86.6 %
786
63 (70%)
N/A
Brown-capped capuchin
A0A2K5PZ11
86.6 %
786
63 (66%)
N/A
Panamanian white-faced capuchin
A0A7N9CHL8
86.5 %
781
63 (68%)
N/A
Crab-eating macaque
A0A2K6LXI6
86.4 %
781
63 (68%)
N/A
Black snub-nosed monkey
A0A5F7ZN63
86.3 %
781
63 (63%)
N/A
Rhesus macaque
A0A2K5NI52
86.2 %
781
63 (65%)
N/A
Sooty mangabey
A0A2K5ECF0
85.7 %
786
63 (72%)
N/A
Ma's night monkey
A0A5F4W412
85.5 %
787
63 (72%)
N/A
White-tufted-ear marmoset
A0A2K6SA82
85.3 %
785
63 (68%)
N/A
Bolivian squirrel monkey
A0A2K6PU31
86.9 %
756
63 (73%)
N/A
Golden snub-nosed monkey
A0A2K6LXG9
86.7 %
756
63 (73%)
N/A
Black snub-nosed monkey
F7IDW8
84.1 %
733
63 (73%)
N/A
White-tufted-ear marmoset
A0A0D9S455
90.1 %
675
63 (79%)
N/A
Green monkey
A0A1U7SZ47
77.5 %
788
52 (54%)
N/A
Philippine tarsier
A0A1U7SSG4
77.5 %
821
63 (78%)
N/A
Philippine tarsier
A0A1U7TAH4
77.5 %
810
63 (76%)
N/A
Philippine tarsier
A0A7J7RRE6
75.2 %
778
63 (68%)
N/A
Greater horseshoe bat
A0A671EVW5
75.1 %
781
63 (72%)
N/A
Greater horseshoe bat
A0A671EW14
74.3 %
778
63 (68%)
N/A
Greater horseshoe bat
A0A7J8H8H2
73.9 %
789
63 (70%)
N/A
Egyptian rousette
F6TSA1
73.7 %
781
63 (72%)
N/A
Horse
H0X414
73.2 %
783
31 (57%)
N/A
Small-eared galago
L5KH41
70.6 %
919
63 (73%)
N/A
Black flying fox
A0A6J0AQK5
71.4 %
801
63 (69%)
N/A
Alpaca
A0A4X1VDH8
71.9 %
782
63 (71%)
N/A
Pig
A0A480T2B5
71.9 %
782
63 (69%)
N/A
Pig
A0A4X1VK76
71.8 %
779
63 (77%)
N/A
Pig
I3N2M5
71.6 %
779
63 (68%)
N/A
Thirteen-lined ground squirrel
A0A3Q7THZ0
71.6 %
783
63 (67%)
N/A
Red fox
A0A811ZN02
71.6 %
784
52 (53%)
N/A
Raccoon dog
A0A7N5KGH7
71.4 %
782
63 (70%)
N/A
Giant panda
A0A3Q7SEY9
71.4 %
784
63 (66%)
N/A
Red fox
A0A833YVI3
71.3 %
777
63 (74%)
N/A
pale spear-nosed bat
A0A6P3IR27
70.9 %
783
52 (53%)
N/A
Bison bison
I3M243
70.0 %
798
63 (69%)
N/A
Thirteen-lined ground squirrel
A0A6J2N3K0
71.0 %
781
63 (72%)
N/A
pale spear-nosed bat
A0A384BHX2
71.0 %
783
63 (71%)
N/A
Polar bear
A0A6P6EXU6
70.5 %
776
63 (71%)
N/A
Degu
A0A4X1VHG0
72.3 %
756
63 (75%)
N/A
Pig
A0A4X1VK71
72.0 %
760
63 (73%)
N/A
Pig
A0A3Q7VJY3
70.9 %
784
31 (51%)
N/A
Ursus arctos
F1N0E6
70.5 %
783
52 (61%)
N/A
Bovine
A0A384BGX6
70.8 %
784
63 (66%)
N/A
Polar bear
A0A6B0RFI1
70.5 %
821
63 (80%)
N/A
wild yak
A0A3Q7S7B1
70.9 %
782
63 (69%)
N/A
Northern fur seal
L7N1A2
70.7 %
774
31 (47%)
N/A
Little brown bat
A0A6P3EPU2
70.3 %
781
63 (72%)
N/A
Sheep
W5PK79
70.3 %
781
63 (72%)
N/A
Sheep
A0A452FAR3
70.3 %
781
63 (68%)
N/A
Goat
A0A6J2C1Q8
70.7 %
782
63 (61%)
N/A
California sealion
A0A4W2GUL1
70.3 %
783
52 (58%)
N/A
Hybrid cattle
L8I5I3
70.4 %
783
63 (66%)
N/A
wild yak
F1S8Z3
70.2 %
764
63 (72%)
N/A
Pig
A0A3Q7T455
70.4 %
781
63 (63%)
N/A
Red fox
A0A2U3YER2
70.4 %
783
63 (62%)
N/A
Weddell seal
A0A452TQS9
70.3 %
780
52 (53%)
N/A
Polar bear
A0A6J0ZD07
70.0 %
779
63 (69%)
N/A
Odocoileus virginianus
A0A3Q7X426
70.2 %
781
52 (53%)
N/A
Ursus arctos
A0A384BI70
70.2 %
781
31 (61%)
N/A
Polar bear
A0A7F8RJM1
70.1 %
784
31 (54%)
N/A
Weddell seal
A0A091DZV0
70.3 %
778
63 (80%)
N/A
Damaraland mole rat
L9JBJ5
70.0 %
878
63 (80%)
N/A
Chinese tree shrew
D2HZC5
71.1 %
759
63 (63%)
N/A
Giant panda
A0A3Q2LQ33
73.9 %
711
63 (73%)
N/A
Horse
A0A6P3QSU5
76.7 %
658
31 (68%)
N/A
Large flying fox
A0A6P6CSU2
78.7 %
638
31 (69%)
N/A
Large flying fox
A0A6J2BZK7
70.5 %
727
31 (48%)
N/A
California sealion
A0A7F8RJU9
70.0 %
724
52 (58%)
N/A
Weddell seal
A0A6J1XJ98
74.9 %
632
31 (74%)
N/A
Cheetah
A0A7F8RK81
76.6 %
619
31 (66%)
N/A
Weddell seal
A0A2Y9KI18
71.0 %
666
63 (71%)
N/A
Enhydra lutris
G3SLD4
72.3 %
611
63 (73%)
N/A
African elephant
G3IFU4
72.6 %
594
52 (56%)
N/A
Chinese hamster
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