P08514F1

Integrin alpha-IIb
AF4
Categories voted by users:
Information
Protein name
Integrin alpha-IIb
Main knot
31 (88%)
Global pLDDT
88.12
Species
Human
UniProt
Structure Prediction Model
AlphaFold v4:  P08514
PDB structures
Structures in KnotProt
Structure in AlphaLasso
  P08514: LL-4,-3  L0
Model length
1039
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
78.5 785-985 201 1-784, 986-1039 784 54
Model Sequence
MARALCPLQALWLLEWVLLLLGPCAAPPAWALNLDPVQLTFYAGPNGSQFGFSLDFHKDSHGRVAIVVGAPRTLGPSQEETGGVFLCPWRAEGGQCPSLLFDLRDETRNVGSQTLQTFKARQGLGASVVSWSDVIVACAPWQHWNVLEKTEEAEKTPVGSCFLAQPESGRRAEYSPCRGNTLSRIYVENDFSWDKRYCEAGFSSVVTQAGELVLGAPGGYYFLGLLAQAPVADIFSSYRPGILLWHVSSQSLSFDSSNPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWSWTLGAVEILDSYYQRLHRLRGEQMASYFGHSVAVTDVNGDGRHDLLVGAPLYMESRADRKLAEVGRVYLFLQPRGPHALGAPSLLLTGTQLYGRFGSAIAPLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLDSPFPTGSAFGFSLRGAVDIDDNGYPDLIVGAYGANQVAVYRAQPVVKASVQLLVQDSLNPAVKSCVLPQTKTPVSCFNIQMCVGATGHNIPQKLSLNAELQLDRQKPRQGRRVLLLGSQQAGTTLNLDLGGKHSPICHTTMAFLRDEADFRDKLSPIVLSLNVSLPPTEAGMAPAVVLHGDTHVQEQTRIVLDCGEDDVCVPQLQLTASVTGSPLLVGADNVLELQMDAANEGEGAYEAELAVHLPQGAHYMRALSNVEGFERLICNQKKENETRVVLCELGNPMKKNAQIGIAMLVSVGNLEEAGESVSFQLQIRSKNSQNPNSKIVLLDVPVRAEAQVELRGNSFPASLVVAAEEGEREQNSLDSWGPKVEHTYELHNNGPGTVNGLHLSIHLPGQSQPSDLLYILDIQPQGGLQCFPQPPVNPLKVDWGLPIPSPSPIHPAHHKRDRRQIFLPEPEQPSRLQDPVLVSCDSAPCTVVQCDLQEMARGQRAMVTVLAFLWLPSLYQRPLDQFVLQSHAWFNVSSLPYAVPPLSLPRGEAQVWTQLLRALEERAIPIWWVLVGVLGGLLLLTILVLAMWKVGFFKRNRPPLEEDDEEGE
Comments
AF1-Unsure
Categories voted by users:
Information
Protein name
Integrin alpha-IIb
Main knot
31 (88%)
Knot fingerprint
K 31 31 41 31 31
Global pLDDT
88.3
Species
Human
UniProt
Structure Prediction Model
AlphaFold v1:  P08514
PDB structures
Structures in KnotProt
Structure in AlphaLasso
  P08514: LL-4,-3  L0
Model length
1039
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
76.4 790-986 197 1-789, 987-1039 789 53 Knot
79.0 808-960 153 1-807, 961-1039 807 79 Slipknot
Model Sequence
MARALCPLQALWLLEWVLLLLGPCAAPPAWALNLDPVQLTFYAGPNGSQFGFSLDFHKDSHGRVAIVVGAPRTLGPSQEETGGVFLCPWRAEGGQCPSLLFDLRDETRNVGSQTLQTFKARQGLGASVVSWSDVIVACAPWQHWNVLEKTEEAEKTPVGSCFLAQPESGRRAEYSPCRGNTLSRIYVENDFSWDKRYCEAGFSSVVTQAGELVLGAPGGYYFLGLLAQAPVADIFSSYRPGILLWHVSSQSLSFDSSNPEYFDGYWGYSVAVGEFDGDLNTTEYVVGAPTWSWTLGAVEILDSYYQRLHRLRGEQMASYFGHSVAVTDVNGDGRHDLLVGAPLYMESRADRKLAEVGRVYLFLQPRGPHALGAPSLLLTGTQLYGRFGSAIAPLGDLDRDGYNDIAVAAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLDSPFPTGSAFGFSLRGAVDIDDNGYPDLIVGAYGANQVAVYRAQPVVKASVQLLVQDSLNPAVKSCVLPQTKTPVSCFNIQMCVGATGHNIPQKLSLNAELQLDRQKPRQGRRVLLLGSQQAGTTLNLDLGGKHSPICHTTMAFLRDEADFRDKLSPIVLSLNVSLPPTEAGMAPAVVLHGDTHVQEQTRIVLDCGEDDVCVPQLQLTASVTGSPLLVGADNVLELQMDAANEGEGAYEAELAVHLPQGAHYMRALSNVEGFERLICNQKKENETRVVLCELGNPMKKNAQIGIAMLVSVGNLEEAGESVSFQLQIRSKNSQNPNSKIVLLDVPVRAEAQVELRGNSFPASLVVAAEEGEREQNSLDSWGPKVEHTYELHNNGPGTVNGLHLSIHLPGQSQPSDLLYILDIQPQGGLQCFPQPPVNPLKVDWGLPIPSPSPIHPAHHKRDRRQIFLPEPEQPSRLQDPVLVSCDSAPCTVVQCDLQEMARGQRAMVTVLAFLWLPSLYQRPLDQFVLQSHAWFNVSSLPYAVPPLSLPRGEAQVWTQLLRALEERAIPIWWVLVGVLGGLLLLTILVLAMWKVGFFKRNRPPLEEDDEEGE
Comments
Domain Eukaryota
Family Hominidae
Species (Full Name) Homo sapiens
PFAM codes  PF00357,  PF01839,  PF08441
InterPro codes  IPR000413,  IPR013517,  IPR013519,  IPR013649,  IPR018184,  IPR028994,  IPR032695
PDB structures (whole Protein)  1DPK A: 1020-1039  1DPQ A: 1020-1039  1KUP A: 1018-1028  1KUZ A: 1018-1028  1M8O A: 1020-1039  1S4W A: 1020-1039  1TYE A/C/E: 32-483  2K1A A: 989-1029  2K9J A: 989-1029  2KNC A: 991-1039  2MTP B: 1019-1039  2N9Y A: 989-1029  2VC2 A: 32-483  2VDK A: 32-483  2VDL A: 32-483  2VDM A: 32-483  2VDN A: 32-483  2VDO A: 32-483  2VDP A: 32-483  2VDQ A: 32-483  2VDR A: 32-483  3FCS A/C: 32-989  3FCU A/C/E: 32-488  3NID A/C: 32-488  3NIF A/C: 32-488  3NIG A/C: 32-488  3T3M A/C: 32-488  3T3P A/C: 32-488  3ZDX A/C: 32-488  3ZDY A/C: 32-488  3ZDZ A/C: 32-488  3ZE0 A/C: 32-488  3ZE1 A/C: 32-488  3ZE2 A/C: 32-488  4CAK A: 32-989  4Z7N A/C: 32-486  4Z7O A/C: 32-486  4Z7Q A/C: 32-485  5HDB A/C: 32-485  6V4P A: 1-963  7KN0 A: 989-1029  7L8P A/C: 32-488  7LA4 A: 1-1039  7TCT A/C: 32-488  7TD8 A/C: 32-484  7THO A/C: 32-485  7TMZ A/C: 32-485  7TPD A/C: 32-488  7U60 A/C: 32-486  7U9F A/C: 32-485  7U9V A/C: 32-485  7UBR A/C: 32-485  7UCY A/C: 32-488  7UDG A/C: 32-488  7UDH A/C: 32-488  7UE0 A/C: 32-488  7UFH A/C: 32-488  7UH8 A/C: 32-488  7UJE A/C: 32-485  7UJK A/C: 32-488  7UK9 A/C: 32-488  7UKO A/C: 32-488  7UKP A/C: 32-488  7UKT A/C: 32-488  7SC4 A/B: 1019-1039  7SFT B: 1019-1039  8GCD A: 1-1039  8GCE A: 1-1039  8T2U A: 32-1039  8T2V A: 32-1039  9AXL A: 1-1039  9DAO A: 32-1039  9DAX A: 32-1039  9DEQ A: 32-1039  9DER A: 32-1039  9E8A A: 1-1039  9E8B A: 32-631  9E8C A/C: 1-1039
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similar chains with experimentally solved models (PDB) in the AlphaKnot 2.0 database (?% sequence similarity)
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similar chains with experimentally solved models not found in AlphaKnot 2.0 database but found in thePDB database (?% sequence similarity)

  
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        #similar chains with experimentally solved models not found in AlphaKnot 2.0 database but found in the pdb database (?% sequence similarity)
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