P23589F1

Carbonic anhydrase 5A, mitochondrial
AF4
Categories voted by users:
Information
Protein name
Carbonic anhydrase 5A, mitochondrial
Main knot
31 (85%)
Global pLDDT
85.54
Species
Mouse
UniProt
Structure Prediction Model
AlphaFold v4:  P23589
PDB structures
Structures in KnotProt
Model length
299
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
97.1 59-288 230 1-58, 289-299
Model Sequence
MLRRDPRKPLAILRHVGLLCATGPQRWRFQHSCAEEHSNCARHPLWTGPVSSAEGTRQSPINIQWKDSVYDPQLAPLRVSYDAASCRYLWNTGYFFQVEFDDSCEDSGISGGPLGNHYRLKQFHFHWGATDEWGSEHAVDGHTYPAELHLVHWNSTKYENYKKASVGENGLAVIGVFLKLGAHHQALQKLVDVLPEVRHKDTQVAMGPFDPSCLLPACRDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSTFRTLLFSGRGEEEDVMVNNYRPLQPLRDRKLRSSFRLDRTKMRS
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Carbonic anhydrase 5A, mitochondrial
Main knot
31 (86%)
Knot fingerprint
K 31
Global pLDDT
85.54
Species
Mouse
UniProt
Structure Prediction Model
AlphaFold v1:  P23589
PDB structures
Structures in KnotProt
Model length
299
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
96.9 59-286 228 1-58, 287-299
Model Sequence
MLRRDPRKPLAILRHVGLLCATGPQRWRFQHSCAEEHSNCARHPLWTGPVSSAEGTRQSPINIQWKDSVYDPQLAPLRVSYDAASCRYLWNTGYFFQVEFDDSCEDSGISGGPLGNHYRLKQFHFHWGATDEWGSEHAVDGHTYPAELHLVHWNSTKYENYKKASVGENGLAVIGVFLKLGAHHQALQKLVDVLPEVRHKDTQVAMGPFDPSCLLPACRDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSTFRTLLFSGRGEEEDVMVNNYRPLQPLRDRKLRSSFRLDRTKMRS
Comments
ESM1
Categories voted by users:
Information
Protein name
Carbonic anhydrase 5A, mitochondrial
Main knot
31 (81%)
Global pLDDT
85.15
Species
Mouse
UniProt
Structure Prediction Model
PDB structures
Structures in KnotProt
Model length
299
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
53.8 59-288 230 1-58, 289-299
Model Sequence
MLRRDPRKPLAILRHVGLLCATGPQRWRFQHSCAEEHSNCARHPLWTGPVSSAEGTRQSPINIQWKDSVYDPQLAPLRVSYDAASCRYLWNTGYFFQVEFDDSCEDSGISGGPLGNHYRLKQFHFHWGATDEWGSEHAVDGHTYPAELHLVHWNSTKYENYKKASVGENGLAVIGVFLKLGAHHQALQKLVDVLPEVRHKDTQVAMGPFDPSCLLPACRDYWTYPGSLTTPPLAESVTWIVQKTPVEVSPSQLSTFRTLLFSGRGEEEDVMVNNYRPLQPLRDRKLRSSFRLDRTKMRS
Comments
Domain Eukaryota
Family Muridae
Species (Full Name) Mus musculus
PFAM codes  PF00194
InterPro codes  IPR001148,  IPR018338,  IPR023561,  IPR036398
PDB structures (whole Protein)  1DMX A/B: 53-299  1DMY A/B: 53-299  1KEQ A/B: 53-299  1URT A: 52-299
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similar chains with experimentally solved models (PDB) in the AlphaKnot 2.0 database (?% sequence similarity)
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similar chains with experimentally solved models not found in AlphaKnot 2.0 database but found in thePDB database (?% sequence similarity)

  
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