| Protein name |
Adenomatous polyposis coli protein
|
| Main knot |
Unknown (100%)
|
| Knot fingerprint |
K Unknown(x4) 61(x15) 41 31(x9)
|
| Global pLDDT |
41.9
|
| Species |
Human
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v1:
 P25054
|
| PDB structures | |
| Model length |
1400
|
| AlphaFold deposition date |
2021-07-01
|
| AlphaKnot deposition date |
2021-12-18
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
41.1 | 199-1193 | 995 | 1-198, 1194-1400 | 198 | 207 |
|
Knot | ||||
 |
43.7 | 223-753 | 531 | 1-222, 754-1400 | 222 | 647 | Slipknot | |||||
 |
41.9 | 67-1235 | 1169 | 1-66, 1236-1400 | 66 | 165 | Slipknot | |||||
 |
41.1 | 409-1202 | 794 | 1-408, 1203-1400 | 408 | 198 | Slipknot |
Model Sequence |
IASSVQSEPCSGMVSGIISPSDLPDSPGQTMPPSRSKTPPPPPQTAQTKREVPKNKAPTAEKRESGPKQAAVNAAVQRVQVLPDADTLLHFATESTPDGFSCSSSLSALSLDEPFIQKDVELRIMPPVQENDNGNETESEQPKESNENQEKEAEKTIDSEKDLLDDSDDDDIEILEECIISAMPTKSSRKAKKPAQTASKLPPPVARKPSQLPVYKLLPSQNRLQPQKHVSFTPGDDMPRVYCVEGTPINFSTATSLSDLTIESPPNELAAGEGVRGGAQSGEFEKRDTIPTEGRSTDEAQGGKTSSVTIPELDDNKAEEGDILAECINSAMPKGKSHKPFRVKKIMDQVQQASASSSAPNKNQLDGKKKKPTSPVKPIPQNTEYRTRVRKNADSKNNLNAERVFSDNKDSKKQNLKNNSKVFNDKLPNNEDRVRGSFAFDSPHHYTPIEGTPYCFSRNDSLSSLDFDDDDVDLSREKAELRKAKENKESEAKVTSHTELTSNQQSANKTQAIAKQPINRGQPKPILQKQSTFPQSSKDIPDRGAATDEKLQNFAIENTPVCFSHNSSLSSLSDIDQENNNKENEPIKETEPPDSQGEPSKPQASGYAPKSFHVEDTPVCFSRNSSLSSLSIDSEDDLLQECISSAMPKKKKPSRLKGDNEKHSPRNMGGILGEDLTLDLKDIQRPDSEHGLSPDSENFDWKAIQEGANSIVSSLHQAAAAACLSRQASSDSDSILSLKSGISLGSPFHLTPDQEEKPFTSNKGPRILKPGEKSTLETKKIESESKGIKGGKKVYKSLITGKVRSNSEISGQMKQPLQANMPSISRGRTMIHIPGVRNSSSSTSPVSKKGPPLKTPASKSPSEGQTATTSPRGAKPSVKSELSPVARQTSQIGGSSKAPSRSGSRDSTPSRPAQQPLSRPIQSPGRNSISPGRNGISPPNKLSQLPRTSSPSTASTKSSGSGKMSYTSPGRQMSQQNLTKQTGLSKNASSIPRSESASKGLNQMNNGNGANKKVELSRMSSTKSSGSESDRSERPVLVRQSTFIKEAPSPTLRRKLEESASFESLSPSSRPASPTRSQAQTPVLSPSLPDMSLSTHSSVQAGGWRKLPPNLSPTIEYNDGRPAKRHDIARSHSESPSRLPINRSGTWKREHSKHSSSLPRVSTWRRTGSSSSILSASSESSEKAKSEDEKHVNSISGTKQSKENQVSAKGTWRKIKENEFSPTNSTSQTVSSGATNGAESKTLIYQMAPAVSKTEDVWVRIEDCPINNPRSGRSPTGNTPPVIDSVSEKANPNIKDSKDNQAKQNVGNGSVPMRTVGLENRLNSFIQVDAPDQKGTEIKPGQNNPVPVSETNESSIVERTPFSSSSSSKHSSPSGTVAARVTPFNYNPSPRKSSADSTSA
|
| Domain |
Eukaryota
|
| Family |
Hominidae
|
| Species (Full Name) |
Homo sapiens
|
| PDB structures (whole Protein) |
 1DEB A/B: 2-55 1EMU B: 2034-2049 1JPP C/D: 1021-1035 1M5I A: 126-250 1T08 C: 1484-1498 1TH1 C/D: 1362-1540 1V18 B: 1482-1528 2RQU B: 1578-1596 3AU3 A: 396-732 3NMW A/B: 407-751 3NMX A/B/C: 407-751 3NMZ A/B: 303-739 3QHE A/C: 396-732 3RL7 G/H/I/J/K/L: 2833-2843 3RL8 F: 2833-2843 3T7U A/B: 407-775 4G69 B: 2833-2843 4YJE A: 407-751 4YJL A/B/C/D/E/F: 407-751 4YK6 A: 407-751 5B6G A: 407-751 5IZ6 A: 407-751 5IZ8 A/B: 407-751 5IZ9 A: 407-751 5IZA A: 407-751 5Z8H A: 407-741
|
#similar chains with experimentally solved models (PDB) in the AlphaKnot 2.0 database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains with experimentally solved models not found in AlphaKnot 2.0 database but found in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
P25054