P40897F1

Oligopeptide transporter 1
AF4
Categories voted by users:
Information
Protein name
Oligopeptide transporter 1
Main knot
52 (71%)
Global pLDDT
86.59
Species
Yeast
UniProt
Structure Prediction Model
AlphaFold v4:  P40897
PDB structures
-
Model length
799
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Knot map - computed using the Web Server in job: 4f26a33f98f913

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range Slipknot tails Slipknot loops Main Knot
92.6 186-741 556 1-185, 742-799 Knot
None 104-608 505 1-103, 609-799 Slipknot
92.4 428-692 265 1-427, 693-799 Slipknot
Model Sequence
MSTIYRESDSLESEPSPTPTTIPIQINMEEEKKDAFVKNIDEDVNNLTATTDEEDRDPESQKFDRHSIQEEGLVWKGDPTYLPNSPYPEVRSAVSIEDDPTIRLNHWRTWFLTTVFVVVFAGVNQFFSLRYPSLEINFLVAQVVCYPIGRILALLPDWKCSKVPFFDLNPGPFTKKEHAVVTIAVALTSSTAYAMYILNAQGSFYNMKLNVGYQFLLVWTSQMIGYGAAGLTRRWVVNPASSIWPQTLISVSLFDSLHSRKVEKTVANGWTMPRYRFFLIVLIGSFIWYWVPGFLFTGLSYFNVILWGSKTRHNFIANTIFGTQSGLGALPITFDYTQVSQAMSGSVFATPFYVSANTYASVLIFFVIVLPCLYFTNTWYAKYMPVISGSTYDNTQNKYNVTKILNEDYSINLEKYKEYSPVFVPFSYLLSYALNFAAVIAVFVHCILYHGKDIVAKFKDRKNGGTDIHMRIYSKNYKDCPDWWYLLLQIVMIGLGFVAVCCFDTKFPAWAFVIAILISLVNFIPQGILEAMTNQHVGLNIITELICGYMLPLRPMANLLFKLYGFIVMRQGLNLSRDLKLAMYMKVSPRLIFAVQIYATIISGMVNVGVQEWMMHNIDGLCTTDQPNGFTCANGRTVFNASIIWSLPKYLFSSGRIYNPLMWFFLIGLLFPLAVYAVQWKFPKFKFAKHIHTPVFFTGPGNIPPSTPYNYSLFFAMSFCLNLIRKRWRAWFNKYNFVMGAGVEAGVAISVVIIFLCVQYPGGKLSWWGNNVWKRTYDNDYKKFYTLKKGETFGYDKWW
Knot Pull simplified model computed using the Web Server in job: 4f26a33f98f913
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Oligopeptide transporter 1
Main knot
52 (65%)
Knot fingerprint
K 52 31 52 31
Global pLDDT
86.59
Species
Yeast
UniProt
Structure Prediction Model
AlphaFold v1:  P40897
PDB structures
-
Model length
799
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range Slipknot tails Slipknot loops Main Knot
92.7 90-741 652 1-89, 742-799 Knot
92.7 179-701 523 1-178, 702-799 Slipknot
Model Sequence
MSTIYRESDSLESEPSPTPTTIPIQINMEEEKKDAFVKNIDEDVNNLTATTDEEDRDPESQKFDRHSIQEEGLVWKGDPTYLPNSPYPEVRSAVSIEDDPTIRLNHWRTWFLTTVFVVVFAGVNQFFSLRYPSLEINFLVAQVVCYPIGRILALLPDWKCSKVPFFDLNPGPFTKKEHAVVTIAVALTSSTAYAMYILNAQGSFYNMKLNVGYQFLLVWTSQMIGYGAAGLTRRWVVNPASSIWPQTLISVSLFDSLHSRKVEKTVANGWTMPRYRFFLIVLIGSFIWYWVPGFLFTGLSYFNVILWGSKTRHNFIANTIFGTQSGLGALPITFDYTQVSQAMSGSVFATPFYVSANTYASVLIFFVIVLPCLYFTNTWYAKYMPVISGSTYDNTQNKYNVTKILNEDYSINLEKYKEYSPVFVPFSYLLSYALNFAAVIAVFVHCILYHGKDIVAKFKDRKNGGTDIHMRIYSKNYKDCPDWWYLLLQIVMIGLGFVAVCCFDTKFPAWAFVIAILISLVNFIPQGILEAMTNQHVGLNIITELICGYMLPLRPMANLLFKLYGFIVMRQGLNLSRDLKLAMYMKVSPRLIFAVQIYATIISGMVNVGVQEWMMHNIDGLCTTDQPNGFTCANGRTVFNASIIWSLPKYLFSSGRIYNPLMWFFLIGLLFPLAVYAVQWKFPKFKFAKHIHTPVFFTGPGNIPPSTPYNYSLFFAMSFCLNLIRKRWRAWFNKYNFVMGAGVEAGVAISVVIIFLCVQYPGGKLSWWGNNVWKRTYDNDYKKFYTLKKGETFGYDKWW
Comments
Domain Eukaryota
Family Saccharomycetaceae
Species (Full Name) Saccharomyces cerevisiae
PFAM codes  PF03169
InterPro codes  IPR004648,  IPR004813
PDB structures (whole Protein) -

Identical Structures in AlphaKnot - computed using the Web Server in job: 4f26a33f98f913
Structure ID Identity Length AF4 Model Topology ESM Model Topology Organism Link
P40897
98.2 %
799
52 (71%)
N/A
Yeast
C8ZB08
98.2 %
799
52 (74%)
N/A
Baker's yeast
A6ZQC8
98.1 %
799
52 (74%)
N/A
strain YJM789
A0A0L8VNC0
98.1 %
799
52 (68%)
N/A
nom. inval.
A0A6C1DTB6
98.0 %
799
52 (71%)
N/A
Lager yeast
G2WGG9
98.0 %
799
52 (76%)
N/A
Baker's yeast
B3LPR9
97.9 %
799
52 (72%)
N/A
strain RM11-1a
H0GIF4
97.9 %
799
52 (75%)
N/A
strain VIN7
B5VKX9
97.9 %
799
52 (77%)
N/A
strain AWRI1631
C7GUE3
96.5 %
798
52 (66%)
N/A
strain JAY291
J5PXZ3
95.6 %
799
52 (73%)
N/A
Yeast
J8PM60
94.6 %
801
52 (74%)
N/A
Yeast
A0A0L8RG39
94.0 %
801
52 (71%)
N/A
Yeast
A0A6C1E957
94.0 %
801
52 (72%)
N/A
Lager yeast
Q6CQ27
84.1 %
793
52 (72%)
N/A
Yeast
A0A0A8L579
84.0 %
793
52 (75%)
N/A
Kluyveromyces dobzhanskii
A0A5P2UK11
88.1 %
793
52 (68%)
N/A
Yeast
W0T4D8
86.9 %
793
52 (69%)
N/A
Yeast
A0A1G4ML19
84.5 %
806
52 (71%)
N/A
Zygosaccharomyces fermentati
C5DWW5
83.8 %
798
52 (67%)
N/A
Candida mogii
A0A1Q3ACJ5
83.6 %
803
52 (60%)
N/A
Candida mogii
A0A1S7HV59
83.5 %
743
52 (69%)
N/A
Zygosaccharomyces parabailii
A0A7H9HYV3
83.0 %
798
52 (71%)
N/A
Torulaspora sp
A0A7G3ZKW1
83.0 %
801
52 (64%)
N/A
Torulaspora globosa
A0A4C2EI90
83.0 %
803
52 (66%)
N/A
Zygosaccharomyces mellis
A0A1G4K224
82.4 %
791
52 (76%)
N/A
Lachancea mirantina
G8ZQW0
81.7 %
792
52 (67%)
N/A
Yeast
A0A1G4KAT6
82.0 %
858
52 (64%)
N/A
Lachancea meyersii
A0A1G4JN76
81.9 %
835
52 (67%)
N/A
Lachancea sp
A0A1X7R371
78.8 %
798
52 (76%)
N/A
Kazachstania saulgeensis
A0A1G4JV28
81.8 %
785
52 (71%)
N/A
Lachancea dasiensis
A0A0P1KM85
80.1 %
827
52 (62%)
N/A
Lachancea quebecensis
A0A1G4JHG8
81.7 %
840
52 (71%)
N/A
Lachancea nothofagi
A0A0C7N2T3
81.0 %
835
52 (69%)
N/A
Lachancea lanzarotensis
C5DGN5
79.9 %
827
52 (63%)
N/A
Yeast
J7S812
79.1 %
790
52 (67%)
N/A
Yeast
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