P9WFY7F1

tRNA (guanine-N(1)-)-methyltransferase
AF4
Categories voted by users:
Information
Protein name
tRNA (guanine-N(1)-)-methyltransferase
Main knot
31 (80%)
Global pLDDT
96.19
Species
Myctu
UniProt
Structure Prediction Model
AlphaFold v4:  P9WFY7
PDB structures
Structures in KnotProt
Model length
230
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
98.0 80-131 52 1-79, 132-230 79 99
Model Sequence
MRIDIVTIFPACLDPLRQSLPGKAIESGLVDLNVHDLRRWTHDVHHSVDDAPYGGGPGMVMKAPVWGEALDEICSSETLLIVPTPAGVLFTQATAQRWTTESHLVFACGRYEGIDQRVVQDAARRMRVEEVSIGDYVLPGGESAAVVMVEAVLRLLAGVLGNPASHQDDSHSTGLDGLLEGPSYTRPASWRGLDVPEVLLSGDHARIAAWRREVSLQRTRERRPDLSHPD
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
tRNA (guanine-N(1)-)-methyltransferase
Main knot
31 (78%)
Knot fingerprint
K 31
Global pLDDT
96.19
Species
Myctu
UniProt
Structure Prediction Model
AlphaFold v1:  P9WFY7
PDB structures
Structures in KnotProt
Model length
230
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
98.1 82-130 49 1-81, 131-230 81 100
Model Sequence
MRIDIVTIFPACLDPLRQSLPGKAIESGLVDLNVHDLRRWTHDVHHSVDDAPYGGGPGMVMKAPVWGEALDEICSSETLLIVPTPAGVLFTQATAQRWTTESHLVFACGRYEGIDQRVVQDAARRMRVEEVSIGDYVLPGGESAAVVMVEAVLRLLAGVLGNPASHQDDSHSTGLDGLLEGPSYTRPASWRGLDVPEVLLSGDHARIAAWRREVSLQRTRERRPDLSHPD
Comments
ESM1
Categories voted by users:
Information
Protein name
tRNA (guanine-N(1)-)-methyltransferase
Main knot
31 (80%)
Global pLDDT
92.74
Species
Myctu
UniProt
Structure Prediction Model
PDB structures
Structures in KnotProt
Model length
230
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
97.0 82-131 50 1-81, 132-230 81 99
Model Sequence
MRIDIVTIFPACLDPLRQSLPGKAIESGLVDLNVHDLRRWTHDVHHSVDDAPYGGGPGMVMKAPVWGEALDEICSSETLLIVPTPAGVLFTQATAQRWTTESHLVFACGRYEGIDQRVVQDAARRMRVEEVSIGDYVLPGGESAAVVMVEAVLRLLAGVLGNPASHQDDSHSTGLDGLLEGPSYTRPASWRGLDVPEVLLSGDHARIAAWRREVSLQRTRERRPDLSHPD
Comments
Domain Bacteria
Family Mycobacteriaceae
Species (Full Name) Mycobacterium tuberculosis
PFAM codes  PF01746
InterPro codes  IPR002649,  IPR016009,  IPR023148,  IPR029026,  IPR029028
PDB structures (whole Protein)  5ZHJ A: 1-230  5ZHK A: 1-230  5ZHL A: 1-230  6JOF A: 1-230
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similar chains with experimentally solved models (PDB) in the AlphaKnot 2.0 database (?% sequence similarity)
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similar chains with experimentally solved models not found in AlphaKnot 2.0 database but found in thePDB database (?% sequence similarity)

  
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