Protein name |
S-adenosylmethionine synthase isoform type-1
|
Main knot |
31 (73%)
|
Global pLDDT |
96.79
|
Species |
Human
|
UniProt | |
Structure Prediction Model |
AlphaFold v4: Q00266
|
PDB structures | |
Structures in KnotProt | |
Model length |
395
|
AlphaFold deposition date |
2022-06-01
|
AlphaKnot deposition date |
2023-01-27
|
Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
---|---|---|---|---|---|---|---|---|---|---|---|
98.5 | 29-290 | 262 | 1-28, 291-395 | 28 | 105 |
Model Sequence |
MNGPVDGLCDHSLSEGVFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDITLEEMRRALKEQVIRAVVPAKYLDEDTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSQKTERELLDVVHKNFDLRPGVIVRDLDLKKPIYQKTACYGHFGRSEFPWEVPRKLVF
|
Protein name |
S-adenosylmethionine synthase isoform type-1
|
Main knot |
31 (70%)
|
Knot fingerprint |
K 31
|
Global pLDDT |
96.6
|
Species |
Human
|
UniProt | |
Structure Prediction Model |
AlphaFold v1: Q00266
|
PDB structures | |
Structures in KnotProt | |
Model length |
395
|
AlphaFold deposition date |
2021-07-01
|
AlphaKnot deposition date |
2021-12-18
|
Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
---|---|---|---|---|---|---|---|---|---|---|---|
97.0 | 26-279 | 254 | 1-25, 280-395 | 25 | 116 |
Model Sequence |
MNGPVDGLCDHSLSEGVFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDITLEEMRRALKEQVIRAVVPAKYLDEDTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSQKTERELLDVVHKNFDLRPGVIVRDLDLKKPIYQKTACYGHFGRSEFPWEVPRKLVF
|
Protein name |
S-adenosylmethionine synthase isoform type-1
|
Main knot |
31 (74%)
|
Global pLDDT |
84.49
|
Species |
Human
|
UniProt | |
Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
PDB structures | |
Structures in KnotProt | |
Model length |
395
|
ESM generation time |
2023-06-23: download the generated 3D model
|
AlphaKnot deposition date |
2023-06-28
|
Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
---|---|---|---|---|---|---|---|---|---|---|---|
74.6 | 26-286 | 261 | 1-25, 287-395 | 25 | 109 |
Model Sequence |
MNGPVDGLCDHSLSEGVFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLPWLRPDSKTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDITLEEMRRALKEQVIRAVVPAKYLDEDTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSQKTERELLDVVHKNFDLRPGVIVRDLDLKKPIYQKTACYGHFGRSEFPWEVPRKLVF
|
Domain |
Eukaryota
|
Family |
Hominidae
|
Species (Full Name) |
Homo sapiens
|
PFAM codes |
PF00438, PF02772, PF02773
|
InterPro codes |
IPR002133, IPR022628, IPR022629, IPR022630, IPR022631, IPR022636
|
PDB structures (whole Protein) |
2OBV A: 16-395 6SW5 A/B/C/D: 1-395 6SW6 A/B: 1-395
|
#similar chains with experimentally solved models (PDB) in the AlphaKnot 2.0 database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains with experimentally solved models not found in AlphaKnot 2.0 database but found in the pdb database (?% sequence similarity) ...loading similar chains, please wait...