| Protein name |
Collagen alpha-1(VII) chain
|
| Main knot |
Unknown (95%)
|
| Knot fingerprint |
K Unknown(x3) 31#41(x3) 31#31(x3) 819(x4) 818(x30) 62(x2) 51(x2) 41 31(x9)
|
| Global pLDDT |
45.6
|
| Species |
Human
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v1:
 Q02388
|
| PDB structures |
-
|
| Model length |
1400
|
| AlphaFold deposition date |
2021-07-01
|
| AlphaKnot deposition date |
2021-12-18
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
44.4 | 724-1079 | 356 | 1-723, 1080-1400 | 723 | 321 |
|
Knot | ||||
 |
44.3 | 810-1020 | 211 | 1-809, 1021-1400 | 809 | 380 | Slipknot | |||||
 |
45.6 | 179-1061 | 883 | 1-178, 1062-1400 | 178 | 339 | Slipknot | |||||
 |
44.9 | 412-1086 | 675 | 1-411, 1087-1400 | 411 | 314 | Slipknot | |||||
 |
44.9 | 317-1008 | 692 | 1-316, 1009-1400 | 316 | 392 | Slipknot | |||||
 |
44.8 | 717-1200 | 484 | 1-716, 1201-1400 | 716 | 200 | Slipknot | |||||
 |
45.2 | 781-1083 | 303 | 1-780, 1084-1400 | 780 | 317 | Slipknot | |||||
 |
44.5 | 734-1299 | 566 | 1-733, 1300-1400 | 733 | 101 | Slipknot | |||||
 |
44.4 | 809-1298 | 490 | 1-808, 1299-1400 | 808 | 102 | Slipknot |
Model Sequence |
DKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGLRGEQGLPGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKGEQGLPGERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGSFLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVGEAGRPGERGERGEKGERGEQGRDGPPGLPGTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPGRGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMGQPGPSGERGLAGPPGREGIPGPLGPPGPPGSVGPPGASGLKGDKGDPGVGLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGPRGAKGDMGERGPRGLDGDKGPRGDNGDPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAGIPGDPGSPGKDGVPGIRGEKGDVGFMGPRGLKGERGVKGACGLDGEKGDKGEAGPPGRPGLAGHKGEMGEPGVPGQSGAPGKEGLIGPKGDRGFDGQPGPKGDQGEKGERGTPGIGGFPGPSGNDGSAGPPGPPGSVGPRGPEGLQGQKGERGPPGERVVGAPGVPGAPGERGEQGRPGPAGPRGEKGEAALTEDDIRGFVRQEMSQ
|
| Domain |
Eukaryota
|
| Family |
Hominidae
|
| Species (Full Name) |
Homo sapiens
|
| PDB structures (whole Protein) |
-
|
Q02388