Q12830 | AlphaKnot 2.0

AF1-Unassigned

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Information

Protein name	Nucleosome-remodeling factor subunit BPTF
Main knot	Unknown (53%)
Knot fingerprint	K Unknown(x10) 8₈(x3) 6₃ 3₁(x12)
Global pLDDT	45.6
Species	Human
UniProt	Q12830
Structure Prediction Model	AlphaFold v1: Q12830
PDB structures	-
Model length	1400
AlphaFold deposition date	2021-07-01
AlphaKnot deposition date	2021-12-18

Knot map

Knot cutoff: 48%

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Knot types & Model sequence

Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length
46.9	41-1347	1307	1-40, 1348-1400	40	53	Knot
33.5	192-486	295	1-191, 487-1400	191	914	Slipknot
33.6	88-452	365	1-87, 453-1400	87	948	Slipknot
47.1	64-1246	1183	1-63, 1247-1400	63	154	Slipknot

Model Sequence

EKQRLEKIKLEGGIKGIGKTSTNSSKNLSESPVITKAKEGCQSDSMRQEQSPNANNDQPEDLIQGCSESDSSVLRMSDPSHTTNKLYPKDRVLDDVSIRSPETKCPKQNSIENDIEEKVSDLASRGQEPSKSKTKGNDFFIDDSKLASADDIGTLICKNKKPLIQEESDTIVSSSKSALHSSVPKSTNDRDATPLSRAMDFEGKLGCDSESNSTLENSSDTVSIQDSSEEDMIVQNSNESISEQFRTREQDVEVLEPLKCELVSGESTGNCEDRLPVKGTEANGKKPSQQKKLEERPVNKCSDQIKLKNTTDKKNNENRESEKKGQRTSTFQINGKDNKPKIYLKGECLKEISESRVVSGNVEPKVNNINKIIPENDIKSLTVKESAIRPFINGDVIMEDFNERNSSETKSHLLSSSDAEGNYRDSLETLPSTKESDSTQTTTPSASCPESNSVNQVEDMEIETSEVKKVTSSPITSEEESNLSNDFIDENGLPINKNENVNGESKRKTVITEVTTMTSTVATESKTVIKVEKGDKQTVVSSTENCAKSTVTTTTTTVTKLSTPSTGGSVDIISVKEQSKTVVTTTVTDSLTTTGGTLVTSMTVSKEYSTRDKVKLMKFSRPKKTRSGTALPSYRKFVTKSSKKSIFVLPNDDLKKLARKGGIREVPYFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVKSLAGVSLMLRLLWASLRWDDMAAKAPPGGGTTRTETSETEITTTEIIKRRDVGPYGIRSEYCIRKIICPIGVPETPKETPTPQRKGLRSSALRPKRPETPKQTGPVIIETWVAEEELELWEIRAFAERVEKEKAQAVEQQAKKRLEQQKPTVIATSTTSPTSSTTSTISPAQKVMVAPISGSVTTGTKMVLTTKVGSPATVTFQQNKNFHQTFATWVKQGQSNSGVVQVQQKVLGIIPSSTGTSQQTFTSFQPRTATVTIRPNTSGSGGTTSNSQVITGPQIRPGMTVIRTPLQQSTLGKAIIRTPVMVQPGAPQQVMTQIIRGQPVSTAVSAPNTVSSTPGQKSLTSATSTSNIQSSASQPPRPQQGQVKLTMAQLTQLTQGHGGNQGLTVVIQGQGQTTGQLQLIPQGVTVLPGPGQQLMQAAMPNGTVQRFLFTPLATTATTASTTTTTVSTTAAGTGEQRQSKLSPQMQVHQDKTLPPAQSSSVGPAEAQPQTAQPSAQPQPQTQPQSPAQPEVQTQPEVQTQTTVSSHVPSEAQPTHAQSSKPQVAAQSQPQSNVQGQSPVRVQSPSQTRIRPSTPSQLSPGQQSQVQTTTSQPIPIQPHTSLQIPSQGQPQSQPQVQSSTQTLSSGQTLNQVTVSSPSRPQLQIQQPQPQVIAVPQLQQQVQVLSQIQSQVVAQIQAQQSGVPQQIKLQLPIQ

Knotting comparison of models

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Comments

Domain	Eukaryota
Family	Hominidae
Species (Full Name)	Homo sapiens
PDB structures (whole Protein)	2F6J A/B/C: 2865-3033 2F6N A/B: 2865-3033 2FSA A/B/C: 2865-3033 2FUI A: 2865-2921 2FUU A: 2865-2921 2RI7 A: 2865-3033 3QZS A/B: 2924-3033 3QZT A: 2924-3033 3QZV A: 2865-3033 3UV2 A: 2914-3037 5H6Y A: 2921-3036 5R4G A: 2917-3037 5R4H A: 2917-3037 5R4I A: 2917-3037 5R4J A: 2917-3037 5R4K A: 2917-3037 5R4L A: 2917-3037 5R4M A: 2917-3037 5R4N A: 2917-3037 5R4O A: 2917-3037 6AZE A: 2866-3032 7K6R A: 2917-3037 7K6S A: 2917-3037 7KDW A/B: 2917-3037 7KDZ A: 2917-3037 6LU5 A: 2925-3032 6LU6 A: 2924-3033 7DMY A: 2917-3037 7DN4 A/B/C/D/E/F: 2917-3037 7F5D A: 2924-3033 7F5E A: 2924-3033 7JT4 A: 2917-3037 7LP0 A/B: 2917-3037 7LPK A/B: 2917-3037 7LRK A/B: 2917-3037 7LRO A/B: 2917-3037 7M2E A: 2917-3037 7RWN A: 2917-3037 7RWO A: 2917-3037 7RWP A: 2917-3037 7RWQ A: 2917-3037 7VD4 A: 2924-3033 8AG2 A: 2917-3037 8F6G A: 2917-3037 8OU2 A/B: 2917-3037

Q12830F7

AF1-Unassigned

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Model Sequence