| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot |
|---|
Model Sequence |
MDTPESPTQSPQSPEEEEKGLSDNELLESPESPAEADKGVSDSELLNDDENEVPEHGGDSDSEDRDRQPAGREDPEELSDVEDYKLDREEREDIHQQEGALRVQEIAQKAIKSPEEEILETPRSPDPVSPAAEHERPFTPAEEERGDDDEEEEEDETTTKSGLGQAELEEEEDEEEERRRRRRAAMVVSDLKDESSVSRDLDEHELDYDEEVPEEPSAAAPEEDEPEKPAVGEDGEDEEEEDEEEEKRRKRKERKPILPPDNRDTPLRKSEDSREGGRRDSFRDKKKEEDDGEIDEGEIDDDDLEEGEVKDPMDRKIRPRPICRFFMKGSFVTMYGNVKFFFFKSYLVFLTGNCTWGMICRFIHPGVNDKGNYSLISKPDPFSPNGAPPGGAAGGGPHPLMPANPWGAPAVEELPPPPPPLDPPVESAWERGLRHAKEVLKKATIRKEQEPDFEEKRFTVTIGEDDRDFDKENDFFRERGGYRITREIRDAGSDPYGDPYYDYEMEAFWRGGQYENFRVQYTETPLPYYPDRERERDPRERHRERERERERDHRERERRQREREREREREREKDSRRRKDEWDRDRLKRDEKEGRPRERPLREPREKKDEKEKTLKPRSPTNMPPRGPMEPPTKKDMLSVTKRPDEWNDPWCRSKSPRRRPGFMGSPPRGRRRHRPSGSSVSLSNSSRSSSRSSSFTGSGSSRSRSRSRSSSMSSYSSHSSQHSSFSGSRSRSGSFSSSPSPSPSAQRNANKNKAEQPPAAAKGPPLKPGALPPPRRDKGPPKVMPSPSLPEQPGKPPKPITETVKPPNPRPPGRPPGPREPREPPNMREGRKKERQQHNPPRRRTVSGSVSGSSYSGSSSRSRSRSSSASASRSGSHKSRSLSVSSVSSVSSASSSSSSVRSADSDDMYADLASPVSSASSRSPTPGHPRKDRGPPRERGPNKERGKPPKKDEPFKDERKRVDPSGLPSKASSDMPRSGNRGHPMHPPPMGPPGGYGSHKDIKLTLLNKQQTDRSNRKRYFPSDKERPPSPLRKRMAMSPDGGRDRRMPGRPPMSPRMERPKGQGPRPMPSQGERKRPLSPPAKSSGKGPAAASAAKPPAPGAGSGSASGSAPGKPSSTLSRREELLKQLKAVEDAIARKRAKIPGK
|
| Protein name |
Zinc finger CCCH domain-containing protein 18
|
| Main knot |
Unknown (67%)
|
| Knot fingerprint |
K Unknown(x2) 76 73(x2) 52(x10) 51(x6) 31
|
| Global pLDDT |
49.62
|
| Species |
Danre
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v1:
Q1LUE5
|
| PDB structures |
-
|
| Model length |
1148
|
| AlphaFold deposition date |
2021-07-01
|
| AlphaKnot deposition date |
2021-12-18
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
48.1 | 16-1131 | 1116 | 1-15, 1132-1148 | 15 | 17 | Knot | |||||
|
|
40.7 | 631-841 | 211 | 1-630, 842-1148 | 630 | 307 | Slipknot | |||||
|
|
47.8 | 341-1034 | 694 | 1-340, 1035-1148 | 340 | 114 | Slipknot | |||||
|
|
48.4 | 157-1084 | 928 | 1-156, 1085-1148 | 156 | 64 | Slipknot | |||||
|
|
44.3 | 559-1035 | 477 | 1-558, 1036-1148 | 558 | 113 | Slipknot | |||||
|
|
45.8 | 526-1081 | 556 | 1-525, 1082-1148 | 525 | 67 | Slipknot |
Model Sequence |
MDTPESPTQSPQSPEEEEKGLSDNELLESPESPAEADKGVSDSELLNDDENEVPEHGGDSDSEDRDRQPAGREDPEELSDVEDYKLDREEREDIHQQEGALRVQEIAQKAIKSPEEEILETPRSPDPVSPAAEHERPFTPAEEERGDDDEEEEEDETTTKSGLGQAELEEEEDEEEERRRRRRAAMVVSDLKDESSVSRDLDEHELDYDEEVPEEPSAAAPEEDEPEKPAVGEDGEDEEEEDEEEEKRRKRKERKPILPPDNRDTPLRKSEDSREGGRRDSFRDKKKEEDDGEIDEGEIDDDDLEEGEVKDPMDRKIRPRPICRFFMKGSFVTMYGNVKFFFFKSYLVFLTGNCTWGMICRFIHPGVNDKGNYSLISKPDPFSPNGAPPGGAAGGGPHPLMPANPWGAPAVEELPPPPPPLDPPVESAWERGLRHAKEVLKKATIRKEQEPDFEEKRFTVTIGEDDRDFDKENDFFRERGGYRITREIRDAGSDPYGDPYYDYEMEAFWRGGQYENFRVQYTETPLPYYPDRERERDPRERHRERERERERDHRERERRQREREREREREREKDSRRRKDEWDRDRLKRDEKEGRPRERPLREPREKKDEKEKTLKPRSPTNMPPRGPMEPPTKKDMLSVTKRPDEWNDPWCRSKSPRRRPGFMGSPPRGRRRHRPSGSSVSLSNSSRSSSRSSSFTGSGSSRSRSRSRSSSMSSYSSHSSQHSSFSGSRSRSGSFSSSPSPSPSAQRNANKNKAEQPPAAAKGPPLKPGALPPPRRDKGPPKVMPSPSLPEQPGKPPKPITETVKPPNPRPPGRPPGPREPREPPNMREGRKKERQQHNPPRRRTVSGSVSGSSYSGSSSRSRSRSSSASASRSGSHKSRSLSVSSVSSVSSASSSSSSVRSADSDDMYADLASPVSSASSRSPTPGHPRKDRGPPRERGPNKERGKPPKKDEPFKDERKRVDPSGLPSKASSDMPRSGNRGHPMHPPPMGPPGGYGSHKDIKLTLLNKQQTDRSNRKRYFPSDKERPPSPLRKRMAMSPDGGRDRRMPGRPPMSPRMERPKGQGPRPMPSQGERKRPLSPPAKSSGKGPAAASAAKPPAPGAGSGSASGSAPGKPSSTLSRREELLKQLKAVEDAIARKRAKIPGK
|
| Domain |
Eukaryota
|
| Family |
Danionidae
|
| Species (Full Name) |
Danio rerio
|
| PDB structures (whole Protein) |
-
|