Q1Z1U1F1

Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
AF4
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Information
Protein name
Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
Main knot
Unknown (49%)
Global pLDDT
87.68
Species
Photobacterium profundum
UniProt
Structure Prediction Model
AlphaFold v4:  Q1Z1U1
PDB structures
-
Model length
1223
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
86.2 185-1029 845 1-184, 1030-1223 184 194
Model Sequence
MVVKSKEILQKRLAENILIIDGGMGTMIQGYKLDENDYRGERFADWHSDLKGNNDLLVLTQPQLIKDIHSEYLEAGADILETNTFNATTIAMADYDMESLSAEINFEAAKLARQAADEWTLKTPSKPRFVAGVLGPTNRTCSISPDVNDPSFRNVTFDQLVEAYSESTRALIAGGVDLILVETIFDTLNAKACTFAVETVFDEDGVVLPIMISGTITDASGRTLSGQTTEAFYNSLRHVKPISFGLNCALGPDELRQYVDELSRISESAVSAHPNAGLPNAFGEYDLSPEDMAEHIEEWAKSGFLNLVGGCCGTTPEHIRLMEQVTRNVKPRQLPDIPVACRLSGLEPLTISADTLFVNVGERTNVTGSARFKRLIKDELYDEALEVARQQVEAGAQIIDINMDEGMLDAEAAMVRFLNLCATEPEISKVPIMVDSSKWEVLEAGLKCVQGKPIVNSISMKEGVDKFIAQAKLIRRYGAAVIVMAFDEEGQADTRERKIEICTNAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYAVDFIEAVGDIKRTLPYAMVSGGVSNVSFSFRGNDPIREAIHAVFLYYCFKNGMDMGIVNAGQLAIYDDLTDELRNAVEDVVLNRRDDSTERLLDIADKYRGSGKVEEDRTLQEWRGWPVEKRLSHALVKGITEFIVEDTEEARTNASKPLEVIEGPLMAGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAHLEPYINAEKQAGYTNGKILLATVKGDVHDIGKNIVGVVLQCNNYEIIDLGVMVSCDQILKVAKEENVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGGATTSKAHTAVKIEENYHAPVVYVSNASRAVGVCSALLSDELRPAFIERLDKEYITVREQHARKKPRTAPVTLEQARENKVAIDWDSYIPPVPAKSGIHVFTDFPISKIRKYIDWTPFFMTWSLSGKYPTILRHEVVGEEAQRLFDDANVLLDEIERTGMIKANGVCGLFPANNIGDDIEVYTDETRSEVMTVLCGLRQQTKKPKGPNYCLSDYIAPKESNKADWIGAFAVTGGIGEYDIAEQFKAKGDDYNAIMIQAIADRLAEAFAECMHETVRKEIWGYAPEESLANEDLIREKYQGIRPAPGYPACPEHTEKGTIWSLLDAEANTGMVLTESYAMWPGAAVSGWYFSHPESRYFAVAQIQEDQRDSYADRKGWDLIEAEKWLGPNL
Comments
Domain Bacteria
Family Vibrionaceae
Species (Full Name) Photobacterium profundum 3TCK
Gene P3TCK_23950
PFAM codes  PF00809,  PF02310,  PF02574,  PF02607,  PF02965
InterPro codes  IPR000489,  IPR003726,  IPR003759,  IPR004223,  IPR006158,  IPR011005,  IPR011822,  IPR033706,  IPR036589,  IPR036594,  IPR036724,  IPR037010
PDB structures (whole Protein) -