| Protein name |
Methionine synthase (EC 2.1.1.13) (5-methyltetrahydrofolate--homocysteine methyltransferase)
|
| Main knot |
Unknown (49%)
|
| Global pLDDT |
87.68
|
| Species |
Photobacterium profundum
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 Q1Z1U1
|
| PDB structures |
-
|
| Model length |
1223
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
86.2 | 185-1029 | 845 | 1-184, 1030-1223 | 184 | 194 |
|
Model Sequence |
MVVKSKEILQKRLAENILIIDGGMGTMIQGYKLDENDYRGERFADWHSDLKGNNDLLVLTQPQLIKDIHSEYLEAGADILETNTFNATTIAMADYDMESLSAEINFEAAKLARQAADEWTLKTPSKPRFVAGVLGPTNRTCSISPDVNDPSFRNVTFDQLVEAYSESTRALIAGGVDLILVETIFDTLNAKACTFAVETVFDEDGVVLPIMISGTITDASGRTLSGQTTEAFYNSLRHVKPISFGLNCALGPDELRQYVDELSRISESAVSAHPNAGLPNAFGEYDLSPEDMAEHIEEWAKSGFLNLVGGCCGTTPEHIRLMEQVTRNVKPRQLPDIPVACRLSGLEPLTISADTLFVNVGERTNVTGSARFKRLIKDELYDEALEVARQQVEAGAQIIDINMDEGMLDAEAAMVRFLNLCATEPEISKVPIMVDSSKWEVLEAGLKCVQGKPIVNSISMKEGVDKFIAQAKLIRRYGAAVIVMAFDEEGQADTRERKIEICTNAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYAVDFIEAVGDIKRTLPYAMVSGGVSNVSFSFRGNDPIREAIHAVFLYYCFKNGMDMGIVNAGQLAIYDDLTDELRNAVEDVVLNRRDDSTERLLDIADKYRGSGKVEEDRTLQEWRGWPVEKRLSHALVKGITEFIVEDTEEARTNASKPLEVIEGPLMAGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAHLEPYINAEKQAGYTNGKILLATVKGDVHDIGKNIVGVVLQCNNYEIIDLGVMVSCDQILKVAKEENVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGGATTSKAHTAVKIEENYHAPVVYVSNASRAVGVCSALLSDELRPAFIERLDKEYITVREQHARKKPRTAPVTLEQARENKVAIDWDSYIPPVPAKSGIHVFTDFPISKIRKYIDWTPFFMTWSLSGKYPTILRHEVVGEEAQRLFDDANVLLDEIERTGMIKANGVCGLFPANNIGDDIEVYTDETRSEVMTVLCGLRQQTKKPKGPNYCLSDYIAPKESNKADWIGAFAVTGGIGEYDIAEQFKAKGDDYNAIMIQAIADRLAEAFAECMHETVRKEIWGYAPEESLANEDLIREKYQGIRPAPGYPACPEHTEKGTIWSLLDAEANTGMVLTESYAMWPGAAVSGWYFSHPESRYFAVAQIQEDQRDSYADRKGWDLIEAEKWLGPNL
|
| Domain |
Bacteria
|
| Family |
Vibrionaceae
|
| Species (Full Name) |
Photobacterium profundum 3TCK
|
| Gene |
P3TCK_23950
|
| PFAM codes |
PF00809, PF02310, PF02574, PF02607, PF02965
|
| InterPro codes |
 IPR000489, IPR003726, IPR003759, IPR004223, IPR006158, IPR011005, IPR011822, IPR033706, IPR036589, IPR036594, IPR036724, IPR037010
|
| PDB structures (whole Protein) |
-
|
Q1Z1U1