Q2R3B7 | AlphaKnot 2.0

AF4

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Information

Protein name	Expressed protein
Main knot	5₂ (76%)
Global pLDDT	82.76
Species	Orysj
UniProt	Q2R3B7
Structure Prediction Model	AlphaFold v4: Q2R3B7
PDB structures	-
Model length	503
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					81.4	28-406	379	1-27, 407-503	27	97

Model Sequence

MEQAAAEAEAERMRREKKDGVVKEVIRLERESVIPILKPKLIMKLAYLVEQDKDRGEFLKLCRRVEYTIRAWYLLQFEDLMQLYALFDPVNGVKSLEQQSLTPDEIETLELNFLTYMFQIMEKSNFKLLSDEEYDVAQSGQYLLNLPIKVDESKVDKKLLTRYFKAHPHDNLPASVDKYIIFRRGIGIDRTTDYFFMEKVDVIISRVWRSLLRVTKIDRLFSKKKQLRAKKDPKKTDEVNEEVEEQEFSVERIRLEKMELSIKNLLSQMTIQEPTFERMIVVYRKSSTEAKPDRGIFVKHFKNIPMADMELVLPEKKNPSLTPMDWVKFLISAVLGLVTLIGSLEMPKADIWVVIAILSGLIGYCAKIYFTFQANMVSYQNLITKSMYDKQLDSGKGTLLHLCDDVIQQEVKEVIVSYYILMEQGKATVQDLDLRCEQLIKEEFGVECNFDVVDAVKKLEKLGIVSRDSIGRIVCVPLKRANDIIGQTTEEMVMRAQQASTGS

Comments

AF1-Unsure

Categories voted by users:

Information

Protein name	Expressed protein
Main knot	5₂ (77%)
Knot fingerprint	K 5₂ 3₁
Global pLDDT	82.76
Species	Orysj
UniProt	Q2R3B7
Structure Prediction Model	AlphaFold v1: Q2R3B7
PDB structures	-
Model length	503
AlphaFold deposition date	2021-07-01
AlphaKnot deposition date	2021-12-18

Knot map

Knot cutoff: 48%

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					81.5	26-408	383	1-25, 409-503	25	95		Knot
					80.8	27-274	248	1-26, 275-503	26	229		Slipknot

Model Sequence

Comments

Domain	Eukaryota
Family	Poaceae
Species (Full Name)	Oryza sativa
PFAM codes	PF12576
InterPro codes	IPR022227
PDB structures (whole Protein)	-

Q2R3B7F1

AF4

Model Sequence

AF1-Unsure

Model Sequence