Q465C6 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Mrr_cat domain-containing protein
Main knot	3₁ (78%)
Global pLDDT	71.03
Species	Methanosarcina barkeri
UniProt	Q465C6
Structure Prediction Model	AlphaFold v4: Q465C6
PDB structures	-
Model length	384
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					88.1	205-355	151	1-204, 356-384	204	29

Model Sequence

MKQDLLEILVDIFKSSGYNATISSQYDIFVEKNKHKAYVRCALQSGREEIKAFTEKIGDCTGIYVMTQKGSEELIDYAAELGIYVWDRDELALQIGRAVLVNLDHKSNISYSEPENQISNDARDQYRQTIFELPVENWKLKEDSREKPYFKEDLLPLQNQQSEAKKISFENQSLTRIFEIKKNLRTPEQVEVPETESYEVLNIRSVEPRISKNQAIIIAKPYIYNPKDAVLKFVPFWKYRYNVEAEKRFRSKVLTIAGKGKGFLNALNKSKEEMEIEGFGTPTRVPAVQYELKRPNVDKKQAGKILLDFIKEENTREIRFNNTEGQAVIYEHRSIGPRSDEIQLDMELVYIPVWEVKGKRNSLEINAYNAKVLEEPVDEDAEFL

Comments

ESM1

Categories voted by users:

Information

Protein name	Mrr_cat domain-containing protein
Main knot	3₁ (80%)
Global pLDDT	77.19
Species	Methanosarcina barkeri
UniProt	Q465C6
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	384
ESM generation time	2023-06-23: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					85.8	205-355	151	1-204, 356-384	204	29

Model Sequence

Comments

Domain	Archaea
Family	Methanosarcinaceae
Species (Full Name)	Methanosarcina barkeri (strain Fusaro / DSM 804)
Gene	Mbar_A3652
PDB structures (whole Protein)	-

Q465C6F1

AF4

Model Sequence

ESM1

Model Sequence