Q468D0F1

WD-40 repeat-containing protein
AF4
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Information
Protein name
WD-40 repeat-containing protein
Main knot
Unknown (99%)
Global pLDDT
73.75
Species
Methanosarcina barkeri
UniProt
Structure Prediction Model
AlphaFold v4:  Q468D0
PDB structures
-
Model length
1229
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
69.7 553-1031 479 1-552, 1032-1229 552 198
Model Sequence
MGPEFQAYVGPRPFEQEDKFIFFGRDREARDLLSLVIAHNLVLVYAQSGAGKTSLLNAGLIPLLEENQFEVFPIVRVKGTILENITTDEISNIYVFNTLASWDEGDYDVESLAKMKLVDFLNEQEHMLDEDGMPLPRAVIFDQFEEIFSLYQDRWKDREGFFEQVSAALEADPLLRVIFVMREDFIAQLDPYVYLLPERLRTRFHMERLRSEAALLAIKEPLRYTGRSFAEGVAEKLVEDLLKIRVETAPGETAEVTGEFIEAVQLQVVCQNLWRELPPDITQITFQHLKTYGNVEQELYRFYEEAIEVATEKTRVDEEGLRRLCGEVLITTMGTRGMVYRAPEYTYGVPNTAIDVLESMHLIRAEWRAGARWYELTHDRFIEPILSSNKVFNDKLAEKKRVEKERAEKERAEKEWAEKEQLEKERLEKEWAERKRAEKERSRNRVIKGLAAISIIILILALSTTYLWIQTEQNKKGALASYLNAKSQNLQEYPTTLDESILLAIESFRISETLHDERLRQELSLDADKLIRQELLSIPHRVVVLNHNGWVNNVVFSPDGKYAATASNDNTARLWDADTGKQIFVLNHSGWVNNVVFSPDGKYAATASNDNTARLWDADTGKQIFVLNHGDWVNNVVFSPDGKYVATASNDNTARLWDADTGKQIFVLNHNGSVNNAVFSPDGKYIATASNDNTARLWNADTGKQIFVLNHNGSVNNAVFSPDGKYIATASNDNTAGLWDADTGKQIFVLNHGSWVNNVVFSPDGKYIATASFDNTARLWDIATGNSIFALNHDSWVYDVMFSPDGKYVATASGDNTARLWDTDTGNPILIMNHNGSVNNVVFSRDGKYIATASDDKTAGLWDIAATEVLNHNGPVYGVVFSRDEKYVATASGDNTARLWDTDTGKQIFVLNHNGPVYNVVFSPGGKYVATASKDNTARLWNADTGKQIFVLNHNGRVYNAVFSPDGKYIATASGDDTARLWDTDTGKQIFVLNHSGWVYDVVFSPDGKYIATASFDNTARLWNAATGEQIFVLRHSDKVLSAVFSPDGKYVATASNDNTARLWDADTGKQIFVLNHGSWVNNVVFSPDGKYIATASNDNTARLWDADTGKQIFVLNHSGWVNNVVFSRDGKYIATASYDKTARLWNADTGKQVFVLNHNGPVYKVVFSSDGKYVATASDDNKARLWIHNKTEDLIHEAGNRLTRNLNKEEWKNYMFDEPYDKTFPNLP
Comments
Domain Archaea
Family Methanosarcinaceae
Species (Full Name) Methanosarcina barkeri (strain Fusaro / DSM 804)
Gene Mbar_A2862
PFAM codes  PF00400,  PF08662
InterPro codes  IPR001680,  IPR013979,  IPR015943,  IPR019775,  IPR020472,  IPR027417,  IPR036322
PDB structures (whole Protein) -