Q47TG3F1

RNA methyltransferase TrmH, group 3
AF4
Categories voted by users:
Information
Protein name
RNA methyltransferase TrmH, group 3
Main knot
31 (93%)
Global pLDDT
80.31
Species
strain YX
UniProt
Structure Prediction Model
AlphaFold v4:  Q47TG3
PDB structures
-
Model length
324
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
93.3 251-293 43 1-250, 294-324 250 31
Model Sequence
MPSKRTKKGPTKGSGGKGRRALAGKKATLPAEKRHWYAEKQRIKAAERAQYLATRKVRVVEELPGATVRARDGSELLIGRNPVVEALRAKVPAVRLLLSNSLDPDERITEAARLAGQQGIAIAEVARPELDRRCERLGLPKAAHQGLILQVEPYEYATADDLLAEARKGETTPLIVALDGVTDPHNLGAIARSAAAFGAHGLLVPERRAAGVTTAAWKASAGTLARIPVAQVVNLTRTLKQFQEAGFFVSGLDADGDTPLDQWELATEPSVVVVGSEGKGLSRLVRETCDVVVSIPIHGVESLNASVAAGVALYEAVRRRTAAK
Comments
ESM1
Categories voted by users:
Information
Protein name
RNA methyltransferase TrmH, group 3
Main knot
31 (82%)
Global pLDDT
88.19
Species
strain YX
UniProt
Structure Prediction Model
PDB structures
-
Model length
324
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
77.8 251-293 43 1-250, 294-324 250 31
Model Sequence
MPSKRTKKGPTKGSGGKGRRALAGKKATLPAEKRHWYAEKQRIKAAERAQYLATRKVRVVEELPGATVRARDGSELLIGRNPVVEALRAKVPAVRLLLSNSLDPDERITEAARLAGQQGIAIAEVARPELDRRCERLGLPKAAHQGLILQVEPYEYATADDLLAEARKGETTPLIVALDGVTDPHNLGAIARSAAAFGAHGLLVPERRAAGVTTAAWKASAGTLARIPVAQVVNLTRTLKQFQEAGFFVSGLDADGDTPLDQWELATEPSVVVVGSEGKGLSRLVRETCDVVVSIPIHGVESLNASVAAGVALYEAVRRRTAAK
Comments
Domain Bacteria
Family Nocardiopsaceae
Species (Full Name) Thermobifida fusca (strain YX)
Gene Tfu_0213
PFAM codes  PF00588,  PF08032
InterPro codes  IPR001537,  IPR004441,  IPR013123,  IPR029026,  IPR029028,  IPR029064
PDB structures (whole Protein) -
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