Q4D1R0F1

Ubiquitin carboxyl-terminal hydrolase
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (72%)
Global pLDDT
90.24
Species
Trycc
UniProt
Structure Prediction Model
AlphaFold v4:  Q4D1R0
PDB structures
-
Model length
310
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
89.1 5-221 217 1-4, 222-310 4 89
Model Sequence
MPSWCLIESDPAVFTELIERFGARGVAVEEILGLEPEFLRQYTNVYGLILLFKWKSGKTPTSDGVVVPDAPVYFARQTVNNACATLAMVNTLLNYSESIQLGDELSNLLEFTREMNAYLRGTQVAESDVLREAHNSFAPTEFFVLHDETPDASDVYHFVSFVYKNGAVWELDGLQKGPILAADATDGNYKEKLVEVVQKRVIDKSAADNTGTGQGISFSLMAVVDDRLLQLEKEIEEAKAREEPTAYLAEQLEELRLQREKGRAENQRRRHNYVPMNVELLKALAEKGKLEGIVEEALAKKAASASSDRK
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (74%)
Knot fingerprint
K 52
Global pLDDT
90.24
Species
Trycc
UniProt
Structure Prediction Model
AlphaFold v1:  Q4D1R0
PDB structures
-
Model length
310
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
89.4 6-224 219 1-5, 225-310 5 86
Model Sequence
MPSWCLIESDPAVFTELIERFGARGVAVEEILGLEPEFLRQYTNVYGLILLFKWKSGKTPTSDGVVVPDAPVYFARQTVNNACATLAMVNTLLNYSESIQLGDELSNLLEFTREMNAYLRGTQVAESDVLREAHNSFAPTEFFVLHDETPDASDVYHFVSFVYKNGAVWELDGLQKGPILAADATDGNYKEKLVEVVQKRVIDKSAADNTGTGQGISFSLMAVVDDRLLQLEKEIEEAKAREEPTAYLAEQLEELRLQREKGRAENQRRRHNYVPMNVELLKALAEKGKLEGIVEEALAKKAASASSDRK
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (71%)
Global pLDDT
90.61
Species
Trycc
UniProt
Structure Prediction Model
PDB structures
-
Model length
310
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
91.3 6-221 216 1-5, 222-310 5 89
Model Sequence
MPSWCLIESDPAVFTELIERFGARGVAVEEILGLEPEFLRQYTNVYGLILLFKWKSGKTPTSDGVVVPDAPVYFARQTVNNACATLAMVNTLLNYSESIQLGDELSNLLEFTREMNAYLRGTQVAESDVLREAHNSFAPTEFFVLHDETPDASDVYHFVSFVYKNGAVWELDGLQKGPILAADATDGNYKEKLVEVVQKRVIDKSAADNTGTGQGISFSLMAVVDDRLLQLEKEIEEAKAREEPTAYLAEQLEELRLQREKGRAENQRRRHNYVPMNVELLKALAEKGKLEGIVEEALAKKAASASSDRK
Comments
Domain Eukaryota
Family Trypanosomatidae
Species (Full Name) Trypanosoma cruzi
PFAM codes  PF01088,  PF18031
InterPro codes  IPR001578,  IPR017390,  IPR036959,  IPR038765,  IPR041507
PDB structures (whole Protein) -
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