Q54N38F1

Ubiquitin carboxyl-terminal hydrolase isozyme L5
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase isozyme L5
Main knot
52 (79%)
Global pLDDT
89.65
Species
Dicdi
UniProt
Structure Prediction Model
AlphaFold v4:  Q54N38
PDB structures
-
Model length
343
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
91.6 9-214 206 1-8, 215-343 8 129
Model Sequence
MSENEGWCTIESDPGVFTELITKIGVKDIQVEELYTLDSSEYDRLKPVLGLIFLFKWEKEEENRTISDNENIFFANQVIQNACATQAILSVLLNSEGIELGEELSNFKSFVGDFPPMMKGEAIGNSELIKETHNSFTVQDPFIFSKKKNRKPSDAFHFISFIPFQGKVYELDGLKKGPYCLGDCTPDNWLEIATPFIQKRMEKYSQGEIRFNLMAVIKNRQTTLQEKILTLEKKKNDLEIKLSELNSGSGGDNKEESGGATPTTKEDLNFMINVVNNDIEEANNEILMEQEKFRNWKDENIRRKHNFTPLILNLIKGLAEKDNLQPLIQKAKDQISQKQQQHK
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase isozyme L5
Main knot
52 (80%)
Knot fingerprint
K 52 31 31
Global pLDDT
89.65
Species
Dicdi
UniProt
Structure Prediction Model
AlphaFold v1:  Q54N38
PDB structures
-
Model length
343
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
91.8 10-216 207 1-9, 217-343 9 127 Knot
91.2 9-178 170 1-8, 179-343 8 165 Slipknot
Model Sequence
MSENEGWCTIESDPGVFTELITKIGVKDIQVEELYTLDSSEYDRLKPVLGLIFLFKWEKEEENRTISDNENIFFANQVIQNACATQAILSVLLNSEGIELGEELSNFKSFVGDFPPMMKGEAIGNSELIKETHNSFTVQDPFIFSKKKNRKPSDAFHFISFIPFQGKVYELDGLKKGPYCLGDCTPDNWLEIATPFIQKRMEKYSQGEIRFNLMAVIKNRQTTLQEKILTLEKKKNDLEIKLSELNSGSGGDNKEESGGATPTTKEDLNFMINVVNNDIEEANNEILMEQEKFRNWKDENIRRKHNFTPLILNLIKGLAEKDNLQPLIQKAKDQISQKQQQHK
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase isozyme L5
Main knot
52 (75%)
Global pLDDT
90.51
Species
Dicdi
UniProt
Structure Prediction Model
PDB structures
-
Model length
343
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
88.4 9-214 206 1-8, 215-343 8 129
Model Sequence
MSENEGWCTIESDPGVFTELITKIGVKDIQVEELYTLDSSEYDRLKPVLGLIFLFKWEKEEENRTISDNENIFFANQVIQNACATQAILSVLLNSEGIELGEELSNFKSFVGDFPPMMKGEAIGNSELIKETHNSFTVQDPFIFSKKKNRKPSDAFHFISFIPFQGKVYELDGLKKGPYCLGDCTPDNWLEIATPFIQKRMEKYSQGEIRFNLMAVIKNRQTTLQEKILTLEKKKNDLEIKLSELNSGSGGDNKEESGGATPTTKEDLNFMINVVNNDIEEANNEILMEQEKFRNWKDENIRRKHNFTPLILNLIKGLAEKDNLQPLIQKAKDQISQKQQQHK
Comments
Domain Eukaryota
Family Dictyosteliaceae
Species (Full Name) Dictyostelium discoideum
PFAM codes  PF01088,  PF18031
InterPro codes  IPR001578,  IPR017390,  IPR036959,  IPR038765,  IPR041507
PDB structures (whole Protein) -
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