Q54T48F1

Probable ubiquitin carboxyl-terminal hydrolase
AF4
Categories voted by users:
Information
Protein name
Probable ubiquitin carboxyl-terminal hydrolase
Main knot
52 (72%)
Global pLDDT
92.23
Species
Dicdi
UniProt
Structure Prediction Model
AlphaFold v4:  Q54T48
PDB structures
-
Model length
255
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
95.3 18-233 216 1-17, 234-255 17 22
Model Sequence
MSVDQELIETQKNWIPLEANPEVLTTFMQSLGVSKDWEFCDIYGIDEGLLEMVPSPCVAVILLFPITNEYEDKRYKLEKEIEEKGQVLSDKVYFMKQYIGNACGTIGVIHSVLNNANVIEFNENGFFKQFLDKTTSLSTEERAISLLKNSEIEKSHEISALQGQSNVPQEDEPVVLHFVSFVHVDGHLYELDGRKPFAINHGESSAETLLKDTANVLQKMIDEDPKEIRFNLMGLVKKPNEESEEEEEKEKEETK
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Probable ubiquitin carboxyl-terminal hydrolase
Main knot
52 (75%)
Knot fingerprint
K 52 31 31
Global pLDDT
92.23
Species
Dicdi
UniProt
Structure Prediction Model
AlphaFold v1:  Q54T48
PDB structures
-
Model length
255
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
95.0 16-236 221 1-15, 237-255 15 19 Knot
94.7 14-180 167 1-13, 181-255 13 75 Slipknot
Model Sequence
MSVDQELIETQKNWIPLEANPEVLTTFMQSLGVSKDWEFCDIYGIDEGLLEMVPSPCVAVILLFPITNEYEDKRYKLEKEIEEKGQVLSDKVYFMKQYIGNACGTIGVIHSVLNNANVIEFNENGFFKQFLDKTTSLSTEERAISLLKNSEIEKSHEISALQGQSNVPQEDEPVVLHFVSFVHVDGHLYELDGRKPFAINHGESSAETLLKDTANVLQKMIDEDPKEIRFNLMGLVKKPNEESEEEEEKEKEETK
Comments
ESM1
Categories voted by users:
Information
Protein name
Probable ubiquitin carboxyl-terminal hydrolase
Main knot
52 (75%)
Global pLDDT
92.75
Species
Dicdi
UniProt
Structure Prediction Model
PDB structures
-
Model length
255
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
87.3 18-233 216 1-17, 234-255 17 22
Model Sequence
MSVDQELIETQKNWIPLEANPEVLTTFMQSLGVSKDWEFCDIYGIDEGLLEMVPSPCVAVILLFPITNEYEDKRYKLEKEIEEKGQVLSDKVYFMKQYIGNACGTIGVIHSVLNNANVIEFNENGFFKQFLDKTTSLSTEERAISLLKNSEIEKSHEISALQGQSNVPQEDEPVVLHFVSFVHVDGHLYELDGRKPFAINHGESSAETLLKDTANVLQKMIDEDPKEIRFNLMGLVKKPNEESEEEEEKEKEETK
Comments
Domain Eukaryota
Family Dictyosteliaceae
Species (Full Name) Dictyostelium discoideum
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -
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