Q58EF9F1

S-adenosylmethionine synthase
AF4
Categories voted by users:
Information
Protein name
S-adenosylmethionine synthase
Main knot
31 (60%)
Global pLDDT
96.34
Species
Danre
UniProt
Structure Prediction Model
AlphaFold v4:  Q58EF9
PDB structures
-
Model length
363
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
98.3 35-329 295 1-34, 330-363 34 34
Model Sequence
MMNGQINGFHNSLIEEDCFLFTSESVGEGHPDKICDQISDAVLDAHLKQDPDAKVACETVAKTGMILLAGEVTSRAVVDYQKVVRDTIKHIGYDDSTKGFDYKTCNVLVALEQQSPDIAQGVHLERDEQDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNSKMAELRRNGTLPWLRPDSKTQVTVQYRQEHGAMLPIRVHTIVISVQHDEDICLDEMRDALKDKVINTVVPSMYLDDDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAKLCRRVLVQVSYAIGVAHPLSISIFHYGTSQKSEQELLKIVKKNFDLRPGVIVR
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
S-adenosylmethionine synthase
Main knot
31 (57%)
Knot fingerprint
K 31
Global pLDDT
96.34
Species
Danre
UniProt
Structure Prediction Model
AlphaFold v1:  Q58EF9
PDB structures
-
Model length
363
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
98.1 28-282 255 1-27, 283-363 27 81
Model Sequence
MMNGQINGFHNSLIEEDCFLFTSESVGEGHPDKICDQISDAVLDAHLKQDPDAKVACETVAKTGMILLAGEVTSRAVVDYQKVVRDTIKHIGYDDSTKGFDYKTCNVLVALEQQSPDIAQGVHLERDEQDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNSKMAELRRNGTLPWLRPDSKTQVTVQYRQEHGAMLPIRVHTIVISVQHDEDICLDEMRDALKDKVINTVVPSMYLDDDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAKLCRRVLVQVSYAIGVAHPLSISIFHYGTSQKSEQELLKIVKKNFDLRPGVIVR
Comments
ESM1
Categories voted by users:
Information
Protein name
S-adenosylmethionine synthase
Main knot
31 (68%)
Global pLDDT
83.71
Species
Danre
UniProt
Structure Prediction Model
PDB structures
-
Model length
363
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
72.8 26-285 260 1-25, 286-363 25 78
Model Sequence
MMNGQINGFHNSLIEEDCFLFTSESVGEGHPDKICDQISDAVLDAHLKQDPDAKVACETVAKTGMILLAGEVTSRAVVDYQKVVRDTIKHIGYDDSTKGFDYKTCNVLVALEQQSPDIAQGVHLERDEQDVGAGDQGLMFGYATDETEECMPLTIVLAHKLNSKMAELRRNGTLPWLRPDSKTQVTVQYRQEHGAMLPIRVHTIVISVQHDEDICLDEMRDALKDKVINTVVPSMYLDDDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAKLCRRVLVQVSYAIGVAHPLSISIFHYGTSQKSEQELLKIVKKNFDLRPGVIVR
Comments
Domain Eukaryota
Family Danionidae
Species (Full Name) Danio rerio
PFAM codes  PF00438,  PF02772,  PF02773
InterPro codes  IPR002133,  IPR022628,  IPR022629,  IPR022630,  IPR022631,  IPR022636
PDB structures (whole Protein) -
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