Q5JK37 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Os01g0929000 protein
Main knot	5₂ (75%)
Global pLDDT	83.25
Species	Orysj
UniProt	Q5JK37
Structure Prediction Model	AlphaFold v4: Q5JK37
PDB structures	-
Model length	488
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					81.9	17-395	379	1-16, 396-488	16	93

Model Sequence

MAEAEAGRKEKKEVVRLERESVIPIMKPKLIMKLAYLIEQQSDREEFLKLCKRIEYTIRAWYHLQFDDMMELFALFDPVHGAQKLQQQNFSTEEVDTLEQNFLTYFFQVMQKSNFNILSDDEVELAHSGQYLLNLPIKVDEAKLDNKLLSKYFKEHHHDNLPEFSDKYVIFRRGIGLDRTSNFFFMEKVDMIIARAWRWFLEKTRLQKLFSRKKSVRPKTDSKKNDDLVGEEEDKELYVERIRLETMNLSLRNLIGKVTIQEPTFEEVIVLYRRKSPKGQNDRSIHVKHFKNIPMADMELVLPEKKNPSLTPMDWVQFIVSVVIGLVTLVSSLEMPKADFWVVVAVLSALAGYCAKIYLSFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEIIISYYILMENGKATIEDLDLQCEELIQEEFGLQCNFEVMDAVQKLERLGIITRDSIGRICCLSLKRANEIIGATTEELVMKARQS

Comments

AF1-Unsure

Categories voted by users:

Information

Protein name	Os01g0929000 protein
Main knot	5₂ (70%)
Knot fingerprint	K 5₂ 3₁
Global pLDDT	83.25
Species	Orysj
UniProt	Q5JK37
Structure Prediction Model	AlphaFold v1: Q5JK37
PDB structures	-
Model length	488
AlphaFold deposition date	2021-07-01
AlphaKnot deposition date	2021-12-18

Knot map

Knot cutoff: 48%

Help Knotting data interpretation

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					81.4	15-398	384	1-14, 399-488	14	90		Knot
					81.4	15-263	249	1-14, 264-488	14	225		Slipknot

Model Sequence

Comments

Domain	Eukaryota
Family	Poaceae
Species (Full Name)	Oryza sativa
PFAM codes	PF12576
InterPro codes	IPR022227
PDB structures (whole Protein)	-

Q5JK37F1

AF4

Model Sequence

AF1-Unsure

Model Sequence