Q6K6Z5F1

Ubiquitin carboxyl-terminal hydrolase
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (63%)
Global pLDDT
89.97
Species
Orysj
UniProt
Structure Prediction Model
AlphaFold v4:  Q6K6Z5
PDB structures
-
Model length
331
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
88.8 4-218 215 1-3, 219-331 3 113
Model Sequence
MSWCTIESDPGVFTELIQEMQVKGVQVEELYSLDVDSISELRPVYGLIFLFKWMAGEKDERPVVKDPNPNLFFASQVIPNACATQAILSILMNRPEIDIGPELSNLKEFTGAFAPDMKGLAINNSDSIRTAHNSFARPEPFVSDEQRAAGKDDEVYHFISYLPFEGVLYELDGLKEGPISLGQCSGGPDDLDWLRMVQPVIQKRIERYSQSEIRFNLMAIIKNRKDVYTAELKELEKRRDQLLQEMNESSAAESLNSELAEVTSAIETVSEKIIMEEEKFKKWRTENIRRKHNYIPFLFNFLKMLAEKKQLKPLVEKAKQQKASSTSTSAR
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (67%)
Knot fingerprint
K 52
Global pLDDT
89.97
Species
Orysj
UniProt
Structure Prediction Model
AlphaFold v1:  Q6K6Z5
PDB structures
-
Model length
331
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
89.4 5-223 219 1-4, 224-331 4 108
Model Sequence
MSWCTIESDPGVFTELIQEMQVKGVQVEELYSLDVDSISELRPVYGLIFLFKWMAGEKDERPVVKDPNPNLFFASQVIPNACATQAILSILMNRPEIDIGPELSNLKEFTGAFAPDMKGLAINNSDSIRTAHNSFARPEPFVSDEQRAAGKDDEVYHFISYLPFEGVLYELDGLKEGPISLGQCSGGPDDLDWLRMVQPVIQKRIERYSQSEIRFNLMAIIKNRKDVYTAELKELEKRRDQLLQEMNESSAAESLNSELAEVTSAIETVSEKIIMEEEKFKKWRTENIRRKHNYIPFLFNFLKMLAEKKQLKPLVEKAKQQKASSTSTSAR
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (70%)
Global pLDDT
90.44
Species
Orysj
UniProt
Structure Prediction Model
PDB structures
-
Model length
331
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
92.4 5-218 214 1-4, 219-331 4 113
Model Sequence
MSWCTIESDPGVFTELIQEMQVKGVQVEELYSLDVDSISELRPVYGLIFLFKWMAGEKDERPVVKDPNPNLFFASQVIPNACATQAILSILMNRPEIDIGPELSNLKEFTGAFAPDMKGLAINNSDSIRTAHNSFARPEPFVSDEQRAAGKDDEVYHFISYLPFEGVLYELDGLKEGPISLGQCSGGPDDLDWLRMVQPVIQKRIERYSQSEIRFNLMAIIKNRKDVYTAELKELEKRRDQLLQEMNESSAAESLNSELAEVTSAIETVSEKIIMEEEKFKKWRTENIRRKHNYIPFLFNFLKMLAEKKQLKPLVEKAKQQKASSTSTSAR
Comments
Domain Eukaryota
Family Poaceae
Species (Full Name) Oryza sativa
PFAM codes  PF01088,  PF18031
InterPro codes  IPR001578,  IPR017390,  IPR036959,  IPR038765,  IPR041507
PDB structures (whole Protein) -
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