Q6L170F1

Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
AF4
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
Main knot
31 (77%)
Global pLDDT
97.02
Species
Picrophilus torridus
UniProt
Structure Prediction Model
AlphaFold v4:  Q6L170
PDB structures
-
Model length
219
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
96.6 151-193 43 1-150, 194-219 150 26
Model Sequence
MLNIVIGDAELETIPDEMRNDPVLRRMANKNKKDINYMLLDSNYMHSIIERYYPGKSNRFGRPDIIYIFLEVALESILNKSGNLRIFIHTKRNKVIEINPEVRLPKSYNRFQGLIEDLFRKNRIVYNGNTLLDMYDMDLLSLLSRFNNVIVLSPHGEKNRLNNIISDDVCFLIGGFSEGDYITDVYKKYKSYSIFNEELTIWSVGMEVITEYERFKGLL
Comments
ESM1
Categories voted by users:
Information
Protein name
Ribosomal RNA small subunit methyltransferase Nep1 (EC 2.1.1.-) (16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)
Main knot
31 (77%)
Global pLDDT
93.91
Species
Picrophilus torridus
UniProt
Structure Prediction Model
PDB structures
-
Model length
219
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
97.1 151-193 43 1-150, 194-219 150 26
Model Sequence
MLNIVIGDAELETIPDEMRNDPVLRRMANKNKKDINYMLLDSNYMHSIIERYYPGKSNRFGRPDIIYIFLEVALESILNKSGNLRIFIHTKRNKVIEINPEVRLPKSYNRFQGLIEDLFRKNRIVYNGNTLLDMYDMDLLSLLSRFNNVIVLSPHGEKNRLNNIISDDVCFLIGGFSEGDYITDVYKKYKSYSIFNEELTIWSVGMEVITEYERFKGLL
Comments
Domain Archaea
Family Picrophilaceae
Species (Full Name) Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828)
Gene nep1 PTO0697
PFAM codes  PF03587
InterPro codes  IPR005304,  IPR023503,  IPR029026,  IPR029028
PDB structures (whole Protein) -
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