Q6Z8U6F1

Os08g0492000 protein
AF4
Categories voted by users:
Information
Protein name
Os08g0492000 protein
Main knot
52 (74%)
Global pLDDT
88.34
Species
Orysj
UniProt
Structure Prediction Model
AlphaFold v4:  Q6Z8U6
PDB structures
-
Model length
752
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
91.7 142-696 555 1-141, 697-752 141 56
Model Sequence
MEQPRLELSSLEGHRSSENPESRDEKTEEEVDDCPIEEVRLTVPITDDPALPALTFRTWLLGLISCAMLAFSNQFFGYRQNPLYISSLSVQIVVLPLGKLMAACLPKKVFRVKGTAWSFSLNPGPFNLKEHVLITIFANTGSNSVYAVGIITIVKAFYRREIHPLAAMLLTQTTQLMGYGWAGLFRKFLVDSPYMWWPSNLVQVSLFRALHEKEKRPKGGTTRLQFFLTVLITSFAYYIVPNYLFPTISTISVVCLVWKKSVTAQQIGSGVYGLGVGSFGLDWATVAGFLGTPLSTPAFAIVNIMAGFFLIVYVIVPAAYWADAYGAKRFPIISSHVFSANGSRYDVNQVLDTATFEFSQAGYDAAGKINLSIFFAFTYGLSFATLAATLSHVALFHGGSIWRQTKAAVSGQGGDVHTRLMKRNYAAVPQWWFQVMLVAVLGLSVFTCEGFGQQLQLPYWGVLLAAGLAFFFTLPIGIITATTNQQPGLNVITELIIGYLYPGRPLANVAFKTYGYISMSQAIMFLQDFKLGHYMKIPPRSMFIVQLVGTVLASSVYFGTSWWLLESVSNICDPAKLPEGSPWTCPGDDVFFNASIIWGVVGPLRMFGRLGLYAKMNYFFLAGALAPVPVWALSRAFPGRAWIGLVNMPVLLGATGMMPPARSVNYLMWGAVGLAFNYVVYRRYKGWWARHNYVLSAGLDAGVAFMGILSYAVLQSRGINGVNWWGLQVDDHCALARCPTAPGVSAPGCPVQ
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Os08g0492000 protein
Main knot
52 (67%)
Knot fingerprint
K 52 31 52 31
Global pLDDT
88.34
Species
Orysj
UniProt
Structure Prediction Model
AlphaFold v1:  Q6Z8U6
PDB structures
-
Model length
752
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
91.9 80-698 619 1-79, 699-752 79 54 Knot
91.7 135-656 522 1-134, 657-752 134 96 Slipknot
Model Sequence
MEQPRLELSSLEGHRSSENPESRDEKTEEEVDDCPIEEVRLTVPITDDPALPALTFRTWLLGLISCAMLAFSNQFFGYRQNPLYISSLSVQIVVLPLGKLMAACLPKKVFRVKGTAWSFSLNPGPFNLKEHVLITIFANTGSNSVYAVGIITIVKAFYRREIHPLAAMLLTQTTQLMGYGWAGLFRKFLVDSPYMWWPSNLVQVSLFRALHEKEKRPKGGTTRLQFFLTVLITSFAYYIVPNYLFPTISTISVVCLVWKKSVTAQQIGSGVYGLGVGSFGLDWATVAGFLGTPLSTPAFAIVNIMAGFFLIVYVIVPAAYWADAYGAKRFPIISSHVFSANGSRYDVNQVLDTATFEFSQAGYDAAGKINLSIFFAFTYGLSFATLAATLSHVALFHGGSIWRQTKAAVSGQGGDVHTRLMKRNYAAVPQWWFQVMLVAVLGLSVFTCEGFGQQLQLPYWGVLLAAGLAFFFTLPIGIITATTNQQPGLNVITELIIGYLYPGRPLANVAFKTYGYISMSQAIMFLQDFKLGHYMKIPPRSMFIVQLVGTVLASSVYFGTSWWLLESVSNICDPAKLPEGSPWTCPGDDVFFNASIIWGVVGPLRMFGRLGLYAKMNYFFLAGALAPVPVWALSRAFPGRAWIGLVNMPVLLGATGMMPPARSVNYLMWGAVGLAFNYVVYRRYKGWWARHNYVLSAGLDAGVAFMGILSYAVLQSRGINGVNWWGLQVDDHCALARCPTAPGVSAPGCPVQ
Comments
Domain Eukaryota
Family Poaceae
Species (Full Name) Oryza sativa
PFAM codes  PF03169
InterPro codes  IPR004648,  IPR004813
PDB structures (whole Protein) -
How to cite