Q717V7F1

Phytochrome
AF4
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Information
Protein name
Phytochrome
Main knot
41 (83%)
Global pLDDT
75.6
Species
Longstalk starwort
UniProt
Structure Prediction Model
AlphaFold v4:  Q717V7
PDB structures
-
Model length
1128
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
82.5 83-383 301 1-82, 384-1128 82 745
Model Sequence
MESRNEGSRTNNNNNSNNPSDTMSRAIAQYTIDARLHAVFEQSGESGKSFDYSQSVKTYTSAESVPEQQITAYLSKIQRGGLIQPFGCMLAIDDLTYRIIAYSQNSVELLGFITTTTTTAVPSLEAVQQRIIAVGTDIRSLFMSSSCVLLEKAFSAREITLLNPVWIHSKANGKPFYAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVESVRQLAAYDRVMVYKFHEDEHGEVVAESKRADLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDCHADSVSVVQDERLRQPLCLVGSTLRAPHGCHSQYMANMGSIASLVMAVIINGNDDEGSTRNAMRLWGLVVCHHTSPRSIPFPLRYACEFLMQAFGLQLNMELQLSAQVLEKRVLRTQTLLCDMILRESPTGIVTQSPSIMDLVKCDGAALLFCGKYYPLGVTPTELQLKDIVQWLLSNHGDSTGLSTDSLADAGYPGALALADAVCGMAVAFITRSDFLFWFRSHPAKEIKWGGAKHHPEDKDDVQRMNPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKDEETTHSKAIVHDQAGDVAMQGIDELSSVAKEMVRLIETAMAPIFAVDADGCINGWNAKASELIGLSVEEAMGKSLVHDLVCEDSKNVTQELLLHALQGDEDKNVEIKLKAFGSQQHKKAVYVVVNACCSKDYTNKIVGVCFVGHDVTGQKNVMDKFVNIQGDYKAIVHSPSPLIPPIFASDENSCCTEWNTAMEILTGYGKEDVIGKTLVGEIFGSICRLKGHDSLTKFMVVLHNAIGGQDSDKFPFSFYNRGGRYVQGLLTANKRTNIDGHITGAFCFLQIASSDLQQALEIQRQQENVCFERMKELAYLCQEIKNPLNGIRFANSLLEATSLGEDQKQFIETSNACEKQIKKILGDIHLESVDESPFELVKTEFMLGNIINAVVSQVMIPLRERELQLIRDIPEEIKTLAVCGDQIRIQQILAEFLVNMVRYAPSPDGWVEIHVLPRLKQVADGATVAYIEYRLVSPGEGLPPDLVQDMFHNSRWTTQEGLGLSMCRKILKLMNGEVQYIRESERSYFFVILELRMPPKQLMNVE
Comments
Domain Eukaryota
Family Caryophyllaceae
Species (Full Name) Stellaria longipes (Longstalk starwort) (Alsine longipes)
Gene PHYB
PFAM codes  PF00360,  PF00512,  PF00989,  PF01590,  PF02518,  PF08446
InterPro codes  IPR000014,  IPR001294,  IPR003018,  IPR003594,  IPR003661,  IPR005467,  IPR012129,  IPR013515,  IPR013516,  IPR013654,  IPR013767,  IPR016132,  IPR029016,  IPR035965,  IPR036890,  IPR043150,  IPR044767
PDB structures (whole Protein) -