| Protein name |
tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
|
| Main knot |
31 (77%)
|
| Global pLDDT |
94.29
|
| Species |
Mycobacterium paratuberculosis
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v4:
 Q73VN9
|
| PDB structures | |
| Model length |
239
|
| AlphaFold deposition date |
2022-06-01
|
| AlphaKnot deposition date |
2023-01-27
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
 |
98.0 | 80-131 | 52 | 1-79, 132-239 | 79 | 108 |
|
Model Sequence |
MRIDVVTIFPAYLDPLRQSLPGKAIQSGLVDLRVHDLRRWTHDAHRSVDDAPYGGGPGMVMKAPVWGEALDEIASAETLLVVPTPAGVLFDQATAARWSAERHLVFACGRYEGIDQRVVEDAARRMRVEEVSIGDYVLPGGESAAVVMIEAVLRLLDGVLGNPASRHDDSHSPALDRRLEGPSYTRPPSWRGLDVPEVLLSGDHARIAAWRREVSLQRTRERRPELLADPVGPQDDPGR
|
| Protein name |
tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
|
| Main knot |
31 (75%)
|
| Global pLDDT |
92.9
|
| Species |
Mycobacterium paratuberculosis
|
| UniProt | |
| Structure Prediction Model |
ESM v1: esmfold_v1 - nov. 2022
|
| PDB structures | |
| Model length |
239
|
| ESM generation time |
2023-06-24: download the generated 3D model
|
| AlphaKnot deposition date |
2023-06-28
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
94.2 | 82-131 | 50 | 1-81, 132-239 | 81 | 108 |
|
Model Sequence |
MRIDVVTIFPAYLDPLRQSLPGKAIQSGLVDLRVHDLRRWTHDAHRSVDDAPYGGGPGMVMKAPVWGEALDEIASAETLLVVPTPAGVLFDQATAARWSAERHLVFACGRYEGIDQRVVEDAARRMRVEEVSIGDYVLPGGESAAVVMIEAVLRLLDGVLGNPASRHDDSHSPALDRRLEGPSYTRPPSWRGLDVPEVLLSGDHARIAAWRREVSLQRTRERRPELLADPVGPQDDPGR
|
| Domain |
Bacteria
|
| Family |
Mycobacteriaceae
|
| Species (Full Name) |
Mycolicibacterium paratuberculosis (strain ATCC BAA-968 / K-10) (Mycobacterium paratuberculosis)
|
| Gene |
trmD MAP_2974c
|
| PFAM codes |
PF01746
|
| InterPro codes |
 IPR002649, IPR016009, IPR023148, IPR029026, IPR029028
|
| PDB structures (whole Protein) |
 8FCH A/B: 1-239 8FCI A/B: 1-239
|
#similar chains with experimentally solved models (PDB) in the AlphaKnot 2.0 database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains with experimentally solved models not found in AlphaKnot 2.0 database but found in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
Q73VN9