Q7XRV1F1

Probable metal-nicotianamine transporter YSL5
AF4
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Information
Protein name
Probable metal-nicotianamine transporter YSL5
Main knot
52 (76%)
Global pLDDT
86.01
Species
Orysj
UniProt
Structure Prediction Model
AlphaFold v4:  Q7XRV1
PDB structures
-
Model length
668
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
87.9 108-636 529 1-107, 637-668 107 32
Model Sequence
MPPPETSSAAAPSPPSPDPLPPWRDQLTLRGVAVAAVLGSLLCVVIHRLNLTVGVIPALNVASGLLAFFLATAWRGAAAVLGLGHHRGRPFTRQENTVIQTCAIACGSLAFSGCSSSYIFAMDRKTYELVGQDYPGNRMEDIRDPSLGWMIGFMFLIALIGPFSIVMLRKVMVIDYKLAFPGGTATALMINSLHGKTEADLAGRKVHCLVKYMSLSFGWSFFKWFFSGVGDSCGFDNFPSFGIEAFKNTFYFNFNPSYVGYGLISPHIVNCSVFLGSVISWGFLWPFIAKQAGDWYPDNLSNTDFRGLYGYKVFIAISVILGDGLYNLVKVFLIIAKEICNARSKEHDLPVQALLQDDDSSRQLLDEKRQTEIFLKDSIPTWLAVSGYIVLAAISTVAVPIIFPQLKWYLVLVCYFLAPAIAFCNSYGMGLTNLNLAPTYGKIALFVFASLVGSDGGVIAGLAACGVIMSIVCSTADLMQDFKSGYLTLSSPRSMFISQMIGVALGCIIAPLTLWLFWTAFDIGDPDGEYKAPFAIIFREMAIIGIEGFAALPRHCLEICCVFFLAALIINLMKDVVPNHVSRFIPIPMAMAVPFYIGAYFGVDMFIGTLILFAWQKIDRREADDYAVAVASGLICGDGVWSIPSAVLSILGVDPPICMSFRPSSASV
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Probable metal-nicotianamine transporter YSL5
Main knot
52 (77%)
Knot fingerprint
K 52 31 31 52
Global pLDDT
86.01
Species
Orysj
UniProt
Structure Prediction Model
AlphaFold v1:  Q7XRV1
PDB structures
-
Model length
668
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
87.8 49-632 584 1-48, 633-668 48 36 Knot
87.6 102-596 495 1-101, 597-668 101 72 Slipknot
Model Sequence
MPPPETSSAAAPSPPSPDPLPPWRDQLTLRGVAVAAVLGSLLCVVIHRLNLTVGVIPALNVASGLLAFFLATAWRGAAAVLGLGHHRGRPFTRQENTVIQTCAIACGSLAFSGCSSSYIFAMDRKTYELVGQDYPGNRMEDIRDPSLGWMIGFMFLIALIGPFSIVMLRKVMVIDYKLAFPGGTATALMINSLHGKTEADLAGRKVHCLVKYMSLSFGWSFFKWFFSGVGDSCGFDNFPSFGIEAFKNTFYFNFNPSYVGYGLISPHIVNCSVFLGSVISWGFLWPFIAKQAGDWYPDNLSNTDFRGLYGYKVFIAISVILGDGLYNLVKVFLIIAKEICNARSKEHDLPVQALLQDDDSSRQLLDEKRQTEIFLKDSIPTWLAVSGYIVLAAISTVAVPIIFPQLKWYLVLVCYFLAPAIAFCNSYGMGLTNLNLAPTYGKIALFVFASLVGSDGGVIAGLAACGVIMSIVCSTADLMQDFKSGYLTLSSPRSMFISQMIGVALGCIIAPLTLWLFWTAFDIGDPDGEYKAPFAIIFREMAIIGIEGFAALPRHCLEICCVFFLAALIINLMKDVVPNHVSRFIPIPMAMAVPFYIGAYFGVDMFIGTLILFAWQKIDRREADDYAVAVASGLICGDGVWSIPSAVLSILGVDPPICMSFRPSSASV
Comments
Domain Eukaryota
Family Poaceae
Species (Full Name) Oryza sativa
PFAM codes  PF03169
InterPro codes  IPR004813,  IPR045035
PDB structures (whole Protein) -
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