Q801V9 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Novel protein
Main knot	4₁ (52%)
Global pLDDT	80.25
Species	Danre
UniProt	Q801V9
Structure Prediction Model	AlphaFold v4: Q801V9
PDB structures	-
Model length	327
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					82.7	51-290	240	1-50, 291-327	50	37

Model Sequence

MASCVSGCSPVMRFCQKLNRLKTLDDDVMATSLKRCLNTVDLALLGVGGMVGSGLYVLTGTVAKDTAGPAVVISFLIAGVASLMAALCYAEFGARVPKTGSAYMFTYVSVGEIWAFLIGWNVILEYMIGGAAVARAWSGYLDSIFNHRIQNFTESHVMRWEVPFLAHYPDLLAAAILLVASFFISFGVRVSSWLNHIFSAISMVVIVFILVFGFILADPVNWSAREGGFAPFGLSGIMAGTATCFYAFVGFDVIAASSEEASNPQRAIPAATAISLGLAATAYVLVSTVLTLMVPWHTLDPNSALSDAFFRRGYSWAGFIVAVGSIC

Comments

ESM1

Categories voted by users:

Information

Protein name	Novel protein
Main knot	4₁ (58%)
Global pLDDT	91.38
Species	Danre
UniProt	Q801V9
Structure Prediction Model	ESM v1: esmfold_v1 - nov. 2022
PDB structures	-
Model length	327
ESM generation time	2023-06-25: download the generated 3D model
AlphaKnot deposition date	2023-06-28

Help

Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					81.6	51-290	240	1-50, 291-327	50	37

Model Sequence

Comments

Domain	Eukaryota
Family	Danionidae
Species (Full Name)	Danio rerio
Gene	slc7a4 dZ266F07.3-001 SO:0001217
PFAM codes	PF13520
InterPro codes	IPR002293
PDB structures (whole Protein)	-

Q801V9F1

AF4

Model Sequence

ESM1

Model Sequence