Q8C261 | AlphaKnot 2.0

AF4

Categories voted by users:

Information

Protein name	Sodium/potassium/calcium exchanger 5
Main knot	3₁ (71%)
Global pLDDT	76.26
Species	Mouse
UniProt	Q8C261
Structure Prediction Model	AlphaFold v4: Q8C261
PDB structures	-
Structure in AlphaLasso	Q8C261: L₀
Model length	501
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					78.7	80-394	315	1-79, 395-501	79	107

Model Sequence

MRTKWGPTWTRRVLLLGIFWVSAYLPVRGVSLPPRLPRATGNSTQCAVSPASEFPEGFFTKQESTDGGIVIYFLIILYMCMAISIVCDKYFLPSLEIISDSLGLSQDVAGATFMAAGSSAPELVTAFLGVFITKGDIGISTILGSAIYNLLGICAACGLLSNMVSTLSCWPLFRDCAVYAVSVGAVFGIIFDNRIYWYEGAGLLLIYGLYVLLLCFDTTISRHVMKTCSPCCPCLARAMEERIEQQTLLGWEDESQLFIRRQSRTDSGIFQEDSGYSQLSLSLHGLSQVSEDPPSVFSMPEADLRRIFWVLSLPIITLLALTTPDCRRKFWKNYFVITFFMSALWISAFTYILVWMVTVTGETLGIPDTVMGLTLLAAGTSIPDTVTSVLVARKGKGDMAISNIVGSNVFDMLCLGLPWFIKTAFTNASAPIEVNSKGLTYITISLNISILFLFLAVHFNGWKLDRKLGVVCLVLYLGLATLSVLYEIGIIGNNRIRGCGV

Comments

AF1-Unassigned

Categories voted by users:

Information

Protein name	Sodium/potassium/calcium exchanger 5
Main knot	3₁ (71%)
Knot fingerprint	K 3₁
Global pLDDT	76.26
Species	Mouse
UniProt	Q8C261
Structure Prediction Model	AlphaFold v1: Q8C261
PDB structures	-
Structure in AlphaLasso	Q8C261: L₀
Model length	501
AlphaFold deposition date	2021-07-01
AlphaKnot deposition date	2021-12-18

Knot map

Knot cutoff: 48%

Help Knotting data interpretation

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					79.6	96-394	299	1-95, 395-501	95	107

Model Sequence

Comments

Domain	Eukaryota
Family	Muridae
Species (Full Name)	Mus musculus
PFAM codes	PF01699
InterPro codes	IPR004481, IPR004837, IPR044880
PDB structures (whole Protein)	-

Q8C261F1

AF4

Model Sequence

AF1-Unassigned

Model Sequence