| Protein name |
Erythrocyte membrane protein 1, PfEMP1
|
| Main knot |
Unknown (63%)
|
| Knot fingerprint |
K Unknown(x2) 31#41(x2) 811(x18) 81(x5) 62(x2) 61(x50) 41(x9) 31(x17)
|
| Global pLDDT |
60.85
|
| Species |
Plaf7
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v1:
 Q8IBX1
|
| PDB structures |
-
|
| Model length |
2267
|
| AlphaFold deposition date |
2021-07-01
|
| AlphaKnot deposition date |
2021-12-18
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
58.4 | 855-1854 | 1000 | 1-854, 1855-2267 | 854 | 413 |
|
Knot | ||||
 |
29.9 | 1775-1874 | 100 | 1-1774, 1875-2267 | 1774 | 393 | Slipknot | |||||
 |
60.4 | 882-1871 | 990 | 1-881, 1872-2267 | 881 | 396 | Slipknot | |||||
 |
57.4 | 707-1944 | 1238 | 1-706, 1945-2267 | 706 | 323 | Slipknot | |||||
 |
56.6 | 865-2123 | 1259 | 1-864, 2124-2267 | 864 | 144 | Slipknot | |||||
 |
49.9 | 1553-1775 | 223 | 1-1552, 1776-2267 | 1552 | 492 | Slipknot | |||||
 |
43.8 | 1550-1879 | 330 | 1-1549, 1880-2267 | 1549 | 388 | Slipknot | |||||
 |
42.5 | 1547-2137 | 591 | 1-1546, 2138-2267 | 1546 | 130 | Slipknot |
Model Sequence |
MASQSGGGSPQDAKHVLDEFGQQVHKEVKKEAERRSKGELKGLLTSAKLSGGEIAGTTDPCSSDYTKHFEANSNRYPCGNTNVDRFPDNDGAECDNSKIKGNKGKEDNSEGACAPYRRLSLCNKNFQNNNNDHSSNAKHDLLLDVCMAANYEAQSLITYHDKHELTNVGSQICTVLARSFADIGDIVRGKDLYLGKKKKKKTETERERDQLEQKLKGIFKKIYEGLTGGVKDHYQDTDNYYELREDWWALNRDQVWKAITCKADNSNRYFRATCDSADGKGSSVARNKCRCKDEEGKNETNEVPTYFDYVPQYLRWFEEWAEDFCRKKKKYVDIVKTYCRGKYQGEERYCSRNGFDCEKTVNARGKVRMGKGCTDCFFACNPYVDWIDNQRKQFLKQRNKYADEIKIYTEGASGGSRQRRNVRSNYDNGYEKKFYKELKNRYGSVETFLVLLNNEKACTAVDDDKGGKIDFKEVNTGGAASGGTSGTNVESQGTFYRSKYCQPCPLCGVERKGGSGWEEKDKIEKCKSINLYKPRDDKVGTTIKILKSGEEEKDIETKLKAFCDNKDSGNSDPSLYDPWQCYQIGELTKDQKEGGEDDLDYEADVQTGGGLCILKKEKKTDNDPDEIQKTFNNFFYYWVAHMLKDSIYWRMKKLERCLQNGNKKCGNQKCEKPCDCFQRWVQQKETEWGKIKTHFNTQNIGALTGCNPIVTLEGVLKLQFLKDESTEDSEENSKNSLDSEELKHLKHLSEMLQGTGVDGLTCSDSGTEQKTLMDKLIDYEEGIATECKKCDEPKPEGAAGGRSDGPPGSPPRPAEKDEDHHSDESDEEEDEEHTEQGEEKTEGKTEEQPEEVKEHTETPEDEVNPCKIVETLFTSDDNNALNEACKQKYQYGKEKFPNWKCIPSGDNSTTSSEGGDRGGQSRAKRAAPRESTTSSGDTTGGSICVPPRRRKLYIKKIVDWAESQSKTLTSVNGDGNGSQEVVSVNGASESGSQGSRSDSSSSSSSDSSQGTTSATSQSPNGDLLTAFVESAAIETFFLWDRYKKIKDIEEKEIKEKNEIYGIYTSSVDEKPQNKLNGGDIPNDFLRLMFYTLGDYRDICIGVKEDVIKALEASSDKNIETIKKAIDEILSKQSRNNQQSGQKSENPRDTWWKTNGEHIWNAMVCALTYNEDTSGAKGKQPQQDQSLKDKLIDKKTGKPEGKYHYEKVTLENSDTQAISNDTINNPKLKDFVEIPPFFRWLHEWGSDFCGKRARMLKNVKHNCRNIDNPGHQYCSGDGYDCEKIKPENYKNISDLDCRDCYKQCRKYRKWIEKKVEEFHKQEKKYKGEHGKLRNDNCSGNDNKEYCEQIKQKTSAADFLAALKHCKNDQIDGEQGNQEDKKNNEIKFEEPLKTFGPLEYCKTCPFNGVNCTVRRGTNGCIENGQIWKKVFEGISGNGENSTITVDMIDRRGPFIEKYLGDSNDLFKTSKLFKGIRKQNWTCKFNKDKNMDVCHLTNFKDNIDLNEYTTFKVLLIYWLEDFLYGYYLLKKKKKIYLCTQNKEQTCSEESKNDCACVKEWIGKKRAEWKTIRDRFNDQYKSENSGDTFPVRSFLEGLIPQIPVADVQGNVIKLSKFGNSCGCSFSAHSTNGKDDAIDCMIKKLEEKVTSCLSSTSGDNLAQCENSTPLEDDDEPFEEEENPENMRPGFCPPPEEKTEIEGTDKKCEEAPTTPPEPAPPAKSGEGTEELPSAPEPPQDKALPKPAAQPKDKKRPKRQPQNPWEHPIVIPSLATSTLMWTVGIGFATFTYFFLKKKTKSSVGNLFQILQIPKGDYDIPTLKSSNRYIPYASERYKGKTYIYMEGDSSGDEKYAFMSDTTDVTSSESEYEEMDINDIYAPRAPKYKTLIEVILEPSKRDTQNDIPSGDINSDIPNTPSDTPSPITDEEWNTLKDDFISNMLQNEQEDIPQPDVSKELPLNTHPTPSHDTLDQKPFIMSIHDRNLLNGEEYSYDIINNIGNNDLYSGFDPKSGDNVSYSGTIGSISDKTSPYSGIDLINDSLNSGNHIDIYDEILKRKENELFGTNHVKHISTHSVAKLTNSDPIECQLNLFHKWLDRHRDMCEKFSNNKEELLDKLKEQWENKTHSGNKHSDIPSGKLSDTPSDNNIHSDIHPSDIPSGKQSDIPSDNNIHSDIPYVLNSDVSIQIDMDNPNQVDDNTYLDTYPDKSTMDTIMDDLEKYNEPYYDIYYDVNDHDASNVDSNNMDVPSKVKIEMSVKNTQMMEGKYPIGDVWDI
|
| Domain |
Eukaryota
|
| Family |
Plasmodiidae
|
| Species (Full Name) |
Plasmodium falciparum
|
| PDB structures (whole Protein) |
-
|
Q8IBX1