Q8IKM8F1

Ubiquitin carboxyl-terminal hydrolase UCHL3
AF4
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Information
Protein name
Ubiquitin carboxyl-terminal hydrolase UCHL3
Main knot
52 (60%)
Global pLDDT
91.25
Species
Plaf7
UniProt
Structure Prediction Model
AlphaFold v4:  Q8IKM8
PDB structures
Structures in KnotProt
Model length
232
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
93.0 10-221 212 1-9, 222-232 9 11
Model Sequence
MAKNDIWTPLESNPDSLYLYSCKLGQSKLKFVDIYGFNNDLLDMIPQPVQAVIFLYPVNDNIVSENNTNDKHNLKENFDNVWFIKQYIPNSCGTIALLHLYGNLRNKFELDKDSVLDDFFNKVNEMSAEKRGQELKNNKSIENLHHEFCGQVENRDDILDVDTHFIVFVQIEGKIIELDGRKDHPTVHCFTNGDNFLYDTGKIIQDKFIEKCKDDLRFSALAVIPNDNFDII
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase UCHL3
Main knot
52 (59%)
Knot fingerprint
K 52 31 31
Global pLDDT
91.25
Species
Plaf7
UniProt
Structure Prediction Model
AlphaFold v1:  Q8IKM8
PDB structures
Structures in KnotProt
Model length
232
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
92.6 7-224 218 1-6, 225-232 6 8 Knot
92.5 8-166 159 1-7, 167-232 7 66 Slipknot
Model Sequence
MAKNDIWTPLESNPDSLYLYSCKLGQSKLKFVDIYGFNNDLLDMIPQPVQAVIFLYPVNDNIVSENNTNDKHNLKENFDNVWFIKQYIPNSCGTIALLHLYGNLRNKFELDKDSVLDDFFNKVNEMSAEKRGQELKNNKSIENLHHEFCGQVENRDDILDVDTHFIVFVQIEGKIIELDGRKDHPTVHCFTNGDNFLYDTGKIIQDKFIEKCKDDLRFSALAVIPNDNFDII
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase UCHL3
Main knot
52 (52%)
Global pLDDT
91.87
Species
Plaf7
UniProt
Structure Prediction Model
PDB structures
Structures in KnotProt
Model length
232
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
92.2 10-221 212 1-9, 222-232 9 11
Model Sequence
MAKNDIWTPLESNPDSLYLYSCKLGQSKLKFVDIYGFNNDLLDMIPQPVQAVIFLYPVNDNIVSENNTNDKHNLKENFDNVWFIKQYIPNSCGTIALLHLYGNLRNKFELDKDSVLDDFFNKVNEMSAEKRGQELKNNKSIENLHHEFCGQVENRDDILDVDTHFIVFVQIEGKIIELDGRKDHPTVHCFTNGDNFLYDTGKIIQDKFIEKCKDDLRFSALAVIPNDNFDII
Comments
Domain Eukaryota
Family Plasmodiidae
Species (Full Name) Plasmodium falciparum
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein)  2WDT A/C: 1-232  2WE6 A/B: 1-232
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similar chains with experimentally solved models (PDB) in the AlphaKnot 2.0 database (?% sequence similarity)
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similar chains with experimentally solved models not found in AlphaKnot 2.0 database but found in thePDB database (?% sequence similarity)

  
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