Q8RWC3 | AlphaKnot 2.0

AF4

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Information

Protein name	Aminopeptidase (DUF3754)
Main knot	5₂ (75%)
Global pLDDT	81.66
Species	Arath
UniProt	Q8RWC3
Structure Prediction Model	AlphaFold v4: Q8RWC3
PDB structures	-
Model length	487
AlphaFold deposition date	2022-06-01
AlphaKnot deposition date	2023-01-27

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					79.4	9-390	382	1-8, 391-487	8	97

Model Sequence

MAEQHNKEVIRLEPESVIPILKPKLIMTLANLIEHSNDRQEFLKLCKRIEYTVRAWYLLQFEDLMQLYSLFDPVHGAQKIQQQNLTSQEIDVLEQNFLAYLFQVMEKSNFKITSNEEMEVAHSGQYLLNLPIKVDESKLDKKLLKRYFEEHPHENIPDFSDKYVIFRRGIGLDKTTDYFFMEKLDVIISRFWSFLMRITRLEKLRAKRSSSLNKKDPKKDDEPNPDTDNDELYVERIRLENSKLSFKSFLSKLTIQEPTFDRMIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVLTSVEMPKSDPWVIIAILSTVLGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGRGTLLHLCDDVIQQEVKEVMICFYILMEQGKATLEDLDLRCEELIKEEFGARCNFDVEDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS

Comments

AF1-Unsure

Categories voted by users:

Information

Protein name	Aminopeptidase (DUF3754)
Main knot	5₂ (70%)
Knot fingerprint	K 5₂ 3₁ 3₁
Global pLDDT	81.66
Species	Arath
UniProt	Q8RWC3
Structure Prediction Model	AlphaFold v1: Q8RWC3
PDB structures	-
Model length	487
AlphaFold deposition date	2021-07-01
AlphaKnot deposition date	2021-12-18

Knot map

Knot cutoff: 48%

Help Knotting data interpretation

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Knot types & Model sequence

					Knot pLDDT	Knot core range	Knot core length	Knot tails range	N-end length	C-end length	Main Knot
					79.5	9-395	387	1-8, 396-487	8	92		Knot
					78.2	8-260	253	1-7, 261-487	7	227		Slipknot

Model Sequence

Comments

Domain	Eukaryota
Family	Brassicaceae
Species (Full Name)	Arabidopsis thaliana
PFAM codes	PF12576
InterPro codes	IPR022227
PDB structures (whole Protein)	-

Q8RWC3F1

AF4

Model Sequence

AF1-Unsure

Model Sequence