Q965V9F1

Ubiquitin carboxyl-terminal hydrolase
AF4
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (56%)
Global pLDDT
92.97
Species
Caeel
UniProt
Structure Prediction Model
AlphaFold v4:  Q965V9
PDB structures
-
Model length
227
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
94.6 13-223 211 1-12, 224-227 12 4
Model Sequence
MTTKGKGGWQALESNPETINPFLKKIGITGLECVDVYSFDDEMLQFVPTPQLALILCFPSAEAREFLSKQYEEVEKNGEKPEGVFFMNQSEEIGNACGTFALFHSLANLENRVNLGKGKFAKWYEKAKLVNEDERSDLLSGDTDLAEAHEETAEEGETEQSDHVDYHFITYVNKNGQLYEIDSCAPFPRPLGATTDSTMIKDASTAIKELMNNVKNLSFSAMALVGK
Comments
AF1-Knot
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (58%)
Knot fingerprint
K 52 31 31
Global pLDDT
92.97
Species
Caeel
UniProt
Structure Prediction Model
AlphaFold v1:  Q965V9
PDB structures
-
Model length
227
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2022-01-13
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
93.3 3-226 224 1-2, 227-227 2 1 Knot
94.0 10-169 160 1-9, 170-227 9 58 Slipknot
Model Sequence
MTTKGKGGWQALESNPETINPFLKKIGITGLECVDVYSFDDEMLQFVPTPQLALILCFPSAEAREFLSKQYEEVEKNGEKPEGVFFMNQSEEIGNACGTFALFHSLANLENRVNLGKGKFAKWYEKAKLVNEDERSDLLSGDTDLAEAHEETAEEGETEQSDHVDYHFITYVNKNGQLYEIDSCAPFPRPLGATTDSTMIKDASTAIKELMNNVKNLSFSAMALVGK
Comments
ESM1
Categories voted by users:
Information
Protein name
Ubiquitin carboxyl-terminal hydrolase
Main knot
52 (56%)
Global pLDDT
90.61
Species
Caeel
UniProt
Structure Prediction Model
PDB structures
-
Model length
227
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
87.4 12-222 211 1-11, 223-227 11 5
Model Sequence
MTTKGKGGWQALESNPETINPFLKKIGITGLECVDVYSFDDEMLQFVPTPQLALILCFPSAEAREFLSKQYEEVEKNGEKPEGVFFMNQSEEIGNACGTFALFHSLANLENRVNLGKGKFAKWYEKAKLVNEDERSDLLSGDTDLAEAHEETAEEGETEQSDHVDYHFITYVNKNGQLYEIDSCAPFPRPLGATTDSTMIKDASTAIKELMNNVKNLSFSAMALVGK
Comments
Domain Eukaryota
Family Rhabditidae
Species (Full Name) Caenorhabditis elegans
PFAM codes  PF01088
InterPro codes  IPR001578,  IPR036959,  IPR038765
PDB structures (whole Protein) -
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