Q9LSH4F1

At3g17740
AF4
Categories voted by users:
Information
Protein name
At3g17740
Main knot
41 (52%)
Global pLDDT
72.48
Species
Arath
UniProt
Structure Prediction Model
AlphaFold v4:  Q9LSH4
PDB structures
-
Model length
1149
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
80.2 446-1139 694 1-445, 1140-1149 445 10
Model Sequence
MSNTPEDGDGAQVTTGGLFPVFPTSANSISAISNAPQWLRNASFTTDLSVINAAASTAPSSSEVEAGDDEDEEGGADGNIGLANQARVYNLVEEEGSLESDDDKVKRKREKKKKRKSDNASDESRSRKSDEYYSKPVKDYYLDTRPDPDNLAYGSIYRMNVPRYKLDNSQRVPGSGSLRFYLRNRRSSMLDTEIDIDSLEGRAKSDTRYWYAKHAAMERNKNFKRIRLSAASEAVDSSFDNFIPLEEDVTVPESDEEDVLSKDSMIGASWEDEVLNKTREFNRVTRERPHDAKAWLAFADFQDKVSSMQSQKGVRLQTLEKKISILEKAFELNPDSEELLLALLKAYRSRDNADVLISRWEKALMQNSASYKLWREFLCVVQGEFSRFKVSEVRRLYSYAIQALSSACSKRHRQVDTTSEPLDSAAIQQELVLVDMLVSLCRFEWQAGYQELATALLQAEVEFSIFSPSLLLTEQSKLRLFEHFWSSNGARVGEEGAFGWLLWLEKEEENRQKILKEESSDDNEVGGWTGWTEQVSGRNGDDIASANTGEVDVDRKGLDEEMEDENSKPEDDTEAMLKLLGIDVNTAASDEVKDTSTWVKWFEEEVSRDHSQWMPTRKAGEFSSVEGMGEGEDEEQLSSVVLYEDINGYLFSLRSKEARLSLVYQFIDFFGAHISPWTSSNSLSWSEKISSLETFSDSMLENLRSVHECLSKSDSANCFSLGSLLGGSCDLSMRTEMMKFLRNAILLCLNVFPRNYILEEAVLVAEELFVTNMKTCEVATMPCQALAKRLLKSDRQDLLLCGVYAQREAASGNMKHARRVFDMALTSICGLPKELQCNTPLLCLWYAESEVANSSGSGRDTESSSRAMHILCYLGSGLAYSPYTSQSSSMQILRARQGFREKLKKIQSTWSHGVTDDQSAALVCSAALFEELTNDLPGALEILEHMFSSVLPGRKSQSHQLELLFNYYVRMLQRHQDDLTLSQLWKPISEGLQLYPLNPELYRALVDICNHRMTSHKLRMMFDDYSRKNSSVVVWLFALSYELSKGGSSHRIRGLFERALAQDTQNNSVILWRCYIAYEIDIADNPSAARRIYFRAINACPWSKKLWLDGFGKLGSVLTAKEMSDLQEVMRDKELNIRTDIYEILLMQG
Comments
AF1-Unsure
Categories voted by users:
Information
Protein name
At3g17740
Main knot
41 (54%)
Knot fingerprint
K 41 41 41
Global pLDDT
72.48
Species
Arath
UniProt
Structure Prediction Model
AlphaFold v1:  Q9LSH4
PDB structures
-
Model length
1149
AlphaFold deposition date
2021-07-01
AlphaKnot deposition date
2021-12-18
Knot map

Knot cutoff: 48%


Help Knotting data interpretation
Help
Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
80.4 57-1143 1087 1-56, 1144-1149 56 6
Model Sequence
MSNTPEDGDGAQVTTGGLFPVFPTSANSISAISNAPQWLRNASFTTDLSVINAAASTAPSSSEVEAGDDEDEEGGADGNIGLANQARVYNLVEEEGSLESDDDKVKRKREKKKKRKSDNASDESRSRKSDEYYSKPVKDYYLDTRPDPDNLAYGSIYRMNVPRYKLDNSQRVPGSGSLRFYLRNRRSSMLDTEIDIDSLEGRAKSDTRYWYAKHAAMERNKNFKRIRLSAASEAVDSSFDNFIPLEEDVTVPESDEEDVLSKDSMIGASWEDEVLNKTREFNRVTRERPHDAKAWLAFADFQDKVSSMQSQKGVRLQTLEKKISILEKAFELNPDSEELLLALLKAYRSRDNADVLISRWEKALMQNSASYKLWREFLCVVQGEFSRFKVSEVRRLYSYAIQALSSACSKRHRQVDTTSEPLDSAAIQQELVLVDMLVSLCRFEWQAGYQELATALLQAEVEFSIFSPSLLLTEQSKLRLFEHFWSSNGARVGEEGAFGWLLWLEKEEENRQKILKEESSDDNEVGGWTGWTEQVSGRNGDDIASANTGEVDVDRKGLDEEMEDENSKPEDDTEAMLKLLGIDVNTAASDEVKDTSTWVKWFEEEVSRDHSQWMPTRKAGEFSSVEGMGEGEDEEQLSSVVLYEDINGYLFSLRSKEARLSLVYQFIDFFGAHISPWTSSNSLSWSEKISSLETFSDSMLENLRSVHECLSKSDSANCFSLGSLLGGSCDLSMRTEMMKFLRNAILLCLNVFPRNYILEEAVLVAEELFVTNMKTCEVATMPCQALAKRLLKSDRQDLLLCGVYAQREAASGNMKHARRVFDMALTSICGLPKELQCNTPLLCLWYAESEVANSSGSGRDTESSSRAMHILCYLGSGLAYSPYTSQSSSMQILRARQGFREKLKKIQSTWSHGVTDDQSAALVCSAALFEELTNDLPGALEILEHMFSSVLPGRKSQSHQLELLFNYYVRMLQRHQDDLTLSQLWKPISEGLQLYPLNPELYRALVDICNHRMTSHKLRMMFDDYSRKNSSVVVWLFALSYELSKGGSSHRIRGLFERALAQDTQNNSVILWRCYIAYEIDIADNPSAARRIYFRAINACPWSKKLWLDGFGKLGSVLTAKEMSDLQEVMRDKELNIRTDIYEILLMQG
Comments
Domain Eukaryota
Family Brassicaceae
Species (Full Name) Arabidopsis thaliana
PFAM codes  PF08424
InterPro codes  IPR003107,  IPR011990,  IPR013633
PDB structures (whole Protein) -
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