| Protein name |
Mediator of RNA polymerase II transcription subunit 1.1
|
| Main knot |
Unknown (51%)
|
| Knot fingerprint |
K Unknown 31#41(x3) 31#31(x15) 63(x5) 61 52(x3) 41(x2) 31(x14)
|
| Global pLDDT |
62.02
|
| Species |
Caeel
|
| UniProt | |
| Structure Prediction Model |
AlphaFold v1:
 Q9N4G4
|
| PDB structures |
-
|
| Model length |
1475
|
| AlphaFold deposition date |
2021-07-01
|
| AlphaKnot deposition date |
2021-12-18
|
| Knot pLDDT | Knot core range | Knot core length | Knot tails range | N-end length | C-end length | Main Knot | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |
50.7 | 771-1331 | 561 | 1-770, 1332-1475 | 770 | 144 |
|
Knot | ||||
 |
43.7 | 875-1082 | 208 | 1-874, 1083-1475 | 874 | 393 | Slipknot | |||||
 |
48.6 | 546-1252 | 707 | 1-545, 1253-1475 | 545 | 223 | Slipknot | |||||
 |
49.3 | 542-1152 | 611 | 1-541, 1153-1475 | 541 | 323 | Slipknot | |||||
 |
52.3 | 759-1247 | 489 | 1-758, 1248-1475 | 758 | 228 | Slipknot | |||||
 |
49.0 | 884-1421 | 538 | 1-883, 1422-1475 | 883 | 54 | Slipknot | |||||
 |
49.1 | 853-1373 | 521 | 1-852, 1374-1475 | 852 | 102 | Slipknot | |||||
 |
51.0 | 898-1342 | 445 | 1-897, 1343-1475 | 897 | 133 | Slipknot |
Model Sequence |
MIIEERKNHELNLESIDRDLRMENVRQSAEKLGWEHFARSVRRNLLEKRQTLDARTRLDVLGSLVFMKEHLPIDNDATIARKVQQLSEGLGEHCVFSTQNSGFSIRNPDVTIDIGVAEDQISTCKIGYFGQPLTDAPGALALMKNGEFSKLRDSITAILSSLPKEITLSEKNACKEAFRALDQLLIRDAADSSFTAINTGKYGFYAPRNELRSGRIYYVAEPVLIRLAEKEGKTKADASYLDLLPYIEISFFKHDKPSKLPVFTQTGEWSTFNDANVCICVRFNQGFLLSQQTIRKLSHIVPKSPLVRNYVNFYRYMTGRVGVKSNLKLLTQFPDEGDIQQQYQVDSKMLTKEDDVVAMEMYLSDFRDLSKLIETLRSEWKHASLWESILAICESSKGEQKEVNAVDMQLVLRRTEFFLQFDTDYGSMTMQIFEKSPSNYVVKTTSQITGESPSLDFDKMLTEKLNSTWSIPATLTFAITDLKCRINSVLNCVISFDSSSSSDKQHQNYWSISNNNTQLMQSAAQKSAAKCTKKKVTVLEVGPAIEPTQLVYTRENDEEFQGSLLSSFGEVDDYYVKTSTIGRTRPQPRPKREPNQLTSMDMMSAELDKSRHTMEGSMRDAQTSSFLDAARVRMKQSIGAAHAVGLASHQPPASPVAAAAAAPGGPMRHNSYPSGFEPPPSVAPYDFPADPSKKQRKQRAKKQPGEEPPAGRGKGGKKGRGAGAVGAAAAGGRKSAGGAGENPFGMDPMRPPMLQRSSSEQHNPNPHQMSQYQMQQYQQNQQFRMHQMQQQQQQQFQMQSPKNPLVPAYTDEDSDEECDPPPPPKPQVSTSSRMSSVPSHPPPPPQQLGNPMVGYPGMPLQSPNHLPLTPSPLSAPPKPFSPEQQHHFGMKMRETSYWKELERLETKPDVEKLKQQLSSSSSSSQAEASDPPSTSTEAQDPPKPSSSSAPPPPKKKLGLEAAISKIRGQQEQALQKQLQQQESVESELATPHPGSSGAPPLAPHQVNRARNLNDIFDDEADDSSPTADIKPSLQALQKPTDTSSQSTSSEPPPKKEPADEQPEREKEKLILKIPKMLKPVVDDRREDRKERDRDRDRDRDRDEDREKVRDKEDKAQREKDKKEKERERRRQRDRDRTEQKKSDREKEPSKKRKLEKKDEKEKDRREPERKKGKSDGKEYSKASTTSLIPTLSLKNFRIPKKDTVEEEKKDVKEEAPGPSSSTESKKEPPSAAPITRKESTTAPVAPAVQQQQQRKESFTALPSLPEQQQHHREPLLKKKPPLQPPPPPQMTGPPIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPPDQMYRDRSGGGGGSMRGGFPPASHYHGGTSGVNKQVASYAQGLPPGMGPPVVKPHGNNYQASQWVRPPTHRDSSHSYHGMPSLGPPQLQREPPAPPPPQMIPLPKDPPVLREHPREHRAHRGGADDDGPDSPEEGTLRIDDE
|
| Domain |
Eukaryota
|
| Family |
Rhabditidae
|
| Species (Full Name) |
Caenorhabditis elegans
|
| PDB structures (whole Protein) |
-
|
Q9N4G4