Q9PR55F1

Uncharacterized protein UU089.1
AF4
Categories voted by users:
Information
Protein name
Uncharacterized protein UU089.1
Main knot
71 (57%)
Global pLDDT
88.93
Species
strain ATCC 700970
UniProt
Structure Prediction Model
AlphaFold v4:  Q9PR55
PDB structures
-
Model length
89
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
Knot map - computed using the Web Server in job: d6dae403939479

Knot cutoff: 48%


Help Knotting data interpretation
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range Slipknot tails Slipknot loops Main Knot
None 12-87 76 1-11, 88-89 Knot
96.1 41-64 24 1-40, 65-89 Slipknot
96.2 31-75 45 1-30, 76-89 Knot
Model Sequence
MYNYKEVKHMGYGKGYLAMFKNKKVRFKVVNSFPDLKVQFVTSFPDYKVKISNSSSFCEETIKIQVVTSFPDVKLQKVTSFGDFEAYID
Knot Pull simplified model computed using the Web Server in job: a1f88e4fd46154
Comments
ESM1
Categories voted by users:
Information
Protein name
Uncharacterized protein UU089.1
Main knot
01 (83%)
Species
strain ATCC 700970
UniProt
Structure Prediction Model
PDB structures
-
Model length
89
ESM generation time
AlphaKnot deposition date
2023-06-28
Help
Model Sequence
MYNYKEVKHMGYGKGYLAMFKNKKVRFKVVNSFPDLKVQFVTSFPDYKVKISNSSSFCEETIKIQVVTSFPDVKLQKVTSFGDFEAYID
Comments
Domain Bacteria
Family Mycoplasmataceae
Species (Full Name) Ureaplasma parvum serovar 3 (strain ATCC 700970)
Gene UU089.1
PDB structures (whole Protein) -

Identical Structures in AlphaKnot - computed using the Web Server in job: d6dae403939479
Structure ID Identity Length AF4 Model Topology ESM Model Topology Organism Link
Q9PR55
97.0 %
89
71 (57%)
01 (83%)
strain ATCC 700970
A0A2C9DYA3
96.7 %
80
71 (53%)
01 (88%)
Ureaplasma parvum serovar 3
A0A356NAZ7
82.2 %
80
71 (50%)
01 (83%)
Clostridiales bacterium
A0A3B8VB67
82.2 %
80
71 (55%)
01 (83%)
Clostridiales bacterium
A0A7K3ZD35
79.1 %
80
71 (52%)
01 (82%)
Crenarchaeota archaeon
A0A246EH72
75.4 %
82
71 (55%)
01 (71%)
Fusobacterium nucleatum subsp
A0A2C6C218
73.6 %
82
71 (63%)
31 (81%)
Fusobacterium nucleatum subsp
A0A3C0W9T3
70.7 %
78
71 (48%)
01 (91%)
Oscillospiraceae bacterium
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