R1CQ17F1

Oligopeptide transporter
AF4
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Information
Protein name
Oligopeptide transporter
Main knot
52 (62%)
Global pLDDT
88.78
Species
Caldisalinibacter kiritimatiensis
UniProt
Structure Prediction Model
AlphaFold v4:  R1CQ17
PDB structures
-
Model length
633
AlphaFold deposition date
2022-06-01
AlphaKnot deposition date
2023-01-27
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Knot types & Model sequence
Knot pLDDT Knot core range Knot core length Knot tails range N-end length C-end length Main Knot
89.7 92-583 492 1-91, 584-633 91 50
Model Sequence
MEKATNAKQEFKPFIPADKILPEFTLTSIIIGIIMAVVFGAANAYLGLKVGMTISASIPAAVISMGIIRGILRKESILENNMVQTIGSAGESLAAGAIFTLPALFIWSAEWGIGTPSLLKITAIALCGGILGVLFMVPLRKALIVNEHGVLPYPEGTACAEVLLAGEEGGEKAKTTFAGLGIGALYKFITGGFKLFPSEIETTIPGYKGAAIGGDVLPALLGVGFIIGPKISAYMLAGAVIGWFGLIPLIANIGSMGEIVMYPATVPLNQLDHWEIWDYYIRYVGAGAVAFGGIFSLIKSLPLIVQTFKDAMKNYSSGVGEGSDVRTNRDLSMKVVLIGSLAVVLAMMMLPIIPVGFGGALLIAIFGFFFATVSSRIVGLVGSSSNPVSGMTIATLIITAIVFKASGNDGHVGMIGTLTVGSIICIIAAMAGDTSQDLKTGFLVGATPKKQQYCELIGALSAALAIGFVLVLLNNAWGFGSQELPAPQATLMRLVIEGVMGGNLPWALVFTGVGIGVAIELLGLPVLPIAIGLYLPIHLSTPIMVGGVIRGILDKKLNKEDGEDSTIKAKIDSGILFASGLIAGEGLIGILLAIFAVLGIDLAFGFSLGQLGALAFFAALTYMLMRYSVLKKS
Comments
Domain Bacteria
Family Thermohalobacteraceae
Species (Full Name) Caldisalinibacter kiritimatiensis
Gene L21TH_1147
PFAM codes  PF03169
InterPro codes  IPR004813,  IPR004814,  IPR045035
PDB structures (whole Protein) -